RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CR1LQ2VPA4 569 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 PYCR3Q53H96 274 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CACHD1Q5VU97 1274 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 DENND2CQ68D51 928 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 RAET1GQ6H3X3 334 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 LCN10Q6JVE6 187 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CYB5D1Q6P9G0 228 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 BRAT1Q6PJG6 821 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 FAM180AQ6UWF9 173 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CD300LDQ6UXZ3 194 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 RRAGAQ7L523 313 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 PPM1KQ8N3J5 372 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 GALNT16Q8N428 558 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 PAF1Q8N7H5 531 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 SLC38A9Q8NBW4 561 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 DNAJB14Q8TBM8 379 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 MTFMTQ96DP5 389 aaKnown RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CNDP1Q96KN2 507 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 USP28Q96RU2 1077 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 SLX1AQ9BQ83 275 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 WDR77Q9BQA1 342 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CXXC4Q9H2H0 198 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 EPB41L1Q9H4G0 881 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 WASH6PQ9NQA3 447 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CCM2LQ9NUG4 571 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 ASNSD1Q9NWL6 643 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 OGFRQ9NZT2 677 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 NTMQ9P121 344 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CPNE7Q9UBL6 633 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 TBC1D29Q9UFV1 150 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 COQ4Q9Y3A0 265 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 PRKAB1Q9Y478 270 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 SLC30A1Q9Y6M5 507 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 PIKFYVEQ9Y2I7 2098 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 A0A0U1RQS6 177 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 H7BY64 318 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 CREB3O43889 395 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 RAMP2O60895 175 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 DAB1O75553 588 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 SCRG1O75711 98 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 UBXN7O94888 489 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 LETM1O95202 739 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 KLK3P07288 261 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 RAB40ALP0C0E4 278 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 EPB41P11171 864 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 NELFEP18615 380 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TSFMP43897 325 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 ADORA2A-AS1P86434 159 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 STK38Q15208 465 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 CYTH1Q15438 398 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 EMC4Q5J8M3 183 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 PRR31Q5SQ13 230 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 PRAMEF17Q5VTA0 474 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 AFMIDQ63HM1 303 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 FAAH2Q6GMR7 532 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 PLEKHA7Q6IQ23 1121 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 RWDD4Q6NW29 188 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 IRGCQ6NXR0 463 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 MTFR2Q6P444 385 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 SHC4Q6S5L8 630 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TMEM207Q6UWW9 146 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 GFRALQ6UXV0 394 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 CERS6Q6ZMG9 384 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 MEX3BQ6ZN04 569 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 FAM183BPQ6ZVS7 135 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 DPPA4Q7L190 304 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 CHST15Q7LFX5 561 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 PRSS42Q7Z5A4 293 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TRIM74Q86UV6 250 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TMEM200AQ86VY9 491 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 DNAAF5Q86Y56 855 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 GALNT13Q8IUC8 556 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TMEM126BQ8IUX1 230 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TTC30BQ8N4P2 665 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 BCORP1Q8N888 145 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 SIDT2Q8NBJ9 832 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 CLEC1AQ8NC01 280 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 ZNF606Q8WXB4 792 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 TMX3Q96JJ7 454 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 MAGEB10Q96LZ2 347 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 FER1L6-AS2Q96M78 137 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 COQ10AQ96MF6 247 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 ZNF641Q96N77 438 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 NT5C1BQ96P26 610 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 FCRL4Q96PJ5 515 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 CPXM1Q96SM3 734 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 NPY6RQ99463 290 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 FOXC2Q99958 501 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 NLNQ9BYT8 704 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 KLC2Q9H0B6 622 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 MAGEH1Q9H213 219 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 ACP6Q9NPH0 428 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 PPARGC1AQ9UBK2 798 aaKnown RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 LHX3Q9UBR4 397 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 KCNK6Q9Y257 313 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 PCYT1BQ9Y5K3 369 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-210ENST00000485247 NBEAL1Q6ZS30 2694 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 JMJD1CQ15652 2540 aa5.21□□□□□ -1.58
PTPN4-210ENST00000485247 DOCK4Q8N1I0 1966 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms