RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 GDAP1Q8TB36 358 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 RNF139Q8WU17 664 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 TFB1MQ8WVM0 346 aaKnown RBP4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 DYDC1Q8WWB3 177 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 PMM1Q92871 262 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 CENPTQ96BT3 561 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 SMARCD1Q96GM5 515 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 HAPLN3Q96S86 360 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 LGMNQ99538 433 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 PRMT1Q99873 361 aaKnown RBP4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 PAIP2Q9BPZ3 127 aaKnown RBP4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 TTLL2Q9BWV7 592 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 WDR12Q9GZL7 423 aaKnown RBP4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 KLK15Q9H2R5 256 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 MLXIPLQ9NP71 852 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 CNGB3Q9NQW8 809 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 PIGVQ9NUD9 493 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 TBC1D23Q9NUY8 699 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 DDIT4Q9NX09 232 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 NKIRAS1Q9NYS0 192 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 DNAJB11Q9UBS4 358 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 LGALS13Q9UHV8 139 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 SLC12A6Q9UHW9 1150 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 FBXW11Q9UKB1 542 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 TLK1Q9UKI8 766 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 CHMP2BQ9UQN3 213 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 PRG3Q9Y2Y8 225 aaPredicted RBP4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 DTNAQ9Y4J8 743 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 TRIM17Q9Y577 477 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 RALGAPA2Q2PPJ7 1873 aa4.3□□□□□ -1.72
TM9SF3-205ENST00000485093 SCN10AQ9Y5Y9 1956 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CLUHO75153 1309 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 A0A1W2PPM1 405 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TMEM120BA0PK00 339 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 C5orf60A6NFR6 353 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 LRRC3CA6NJW4 275 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 HACD1B0YJ81 288 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 ZNF487B1APH4 448 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TRAPPC3O43617 180 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 MFSD11O43934 449 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 NBNO60934 754 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CDH16O75309 829 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PEX14O75381 377 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PIAS1O75925 651 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 LATS1O95835 1130 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 F9P00740 461 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 MT-ND3P03897 115 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SRGAP2BP0DMP2 458 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 ERCC2P18074 760 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 GCAP28676 217 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PRKAR1BP31321 381 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 STX2P32856 288 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 MAP2K2P36507 400 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 FDFT1P37268 417 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CDK7P50613 346 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CCT8P50990 548 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PGDP52209 483 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PRKAG1P54619 331 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 GEMIN4P57678 1058 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TPI1P60174 286 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PSG6Q00889 435 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 YWHAHQ04917 246 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 EIF2B5Q13144 721 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 BFSP2Q13515 415 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 ATP1A4Q13733 1029 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SPARCL1Q14515 664 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 EFTUD2Q15029 972 aaKnown RBP eCLIP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PAFAH1B3Q15102 231 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PDK1Q15118 436 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 MAPRE1Q15691 268 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 ANKRD20A2Q5SQ80 823 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TMTC4Q5T4D3 741 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 ANKRD20A1Q5TYW2 823 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 FAM171A1Q5VUB5 890 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 ANKRD20A3Q5VUR7 823 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PM20D1Q6GTS8 502 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 VSTM1Q6UX27 236 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 C4orf22Q6V702 233 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PPP1R21Q6ZMI0 780 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 C4orf50Q6ZRC1 276 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 DENND5BQ6ZUT9 1274 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 RFX8Q6ZV50 586 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 LRRC8DQ7L1W4 858 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PID1Q7Z2X4 250 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 TADA2BQ86TJ2 420 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 VSIG1Q86XK7 387 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 PSTKQ8IV42 348 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CTAGE3PQ8IX95 158 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 VPS52Q8N1B4 723 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 STKLD1Q8NE28 680 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SCAMP5Q8TAC9 235 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 HTR3CQ8WXA8 447 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 IRGQQ8WZA9 623 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 SEPT8Q92599 483 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 NT5C3BQ969T7 300 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 CHMP6Q96FZ7 201 aa4.29□□□□□ -1.72
TM9SF3-205ENST00000485093 P2RY11Q96G91 374 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms