RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SPAG9O60271 1321 aaKnown RBP4.37□□□□□ -1.71
VPS13A-211ENST00000484581 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 OR2M5A3KFT3 312 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CCDC69A6NI79 296 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 I6L893 689 aaPredicted RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 VWA5AO00534 786 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 ADAM10O14672 748 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 MEIS2O14770 477 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 AP5Z1O43299 807 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 SELENOFO60613 162 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 B3GALNT1O75752 331 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 EPN2O95208 641 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 PLA2G4BP0C869 781 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CD22P20273 847 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 AZGP1P25311 298 aaKnown RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 TKTP29401 623 aaKnown RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CD86P42081 329 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 FRKP42685 505 aaPredicted RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 KCNJ1P48048 391 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 SLC9A3P48764 834 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CLCNKAP51800 687 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 YBEYP58557 167 aaPredicted RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 KIAA1024LP59773 190 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CRYZQ08257 329 aaKnown RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 TROAPQ12815 778 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 HNF4GQ14541 408 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 RPS6KA1Q15418 735 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 AMZ1Q400G9 498 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 MDH1BQ5I0G3 518 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 SPOUT1Q5T280 376 aaKnown RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 SLC18B1Q6NT16 456 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 TMPRSS11FQ6ZWK6 438 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 KCTD9Q7L273 389 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CHERPQ8IWX8 916 aaKnown RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 C1orf52Q8N6N3 182 aaKnown RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF611Q8N823 705 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 C7orf57Q8NEG2 295 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 ACVR1CQ8NER5 493 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 MAGEC3Q8TD91 643 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 RND1Q92730 232 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 CENPTQ96BT3 561 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM237Q96Q45 408 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 FOXP1Q9H334 677 aaPredicted RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 MINDY3Q9H8M7 445 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 TBC1D7Q9P0N9 293 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 TRPC4Q9UBN4 977 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 IL19Q9UHD0 177 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 PADI2Q9Y2J8 665 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 MTF2Q9Y483 593 aaPredicted RBP4.36□□□□□ -1.71
VPS13A-211ENST00000484581 PCDHGA1Q9Y5H4 931 aa4.36□□□□□ -1.71
VPS13A-211ENST00000484581 PRSS51A0A1B0GVH4 220 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SDR42E2A6NKP2 422 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SOCS6O14544 535 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 KCNAB3O43448 404 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 NDUFB8O95169 186 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SLC16A8O95907 504 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 INHBAP08476 426 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 FGF2P09038 288 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 HMOX1P09601 288 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 CYP19A1P11511 503 aaPredicted RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 GAP43P17677 238 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 IL10P22301 178 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 NUDT6P53370 316 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SLC12A3P55017 1021 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 FHL1Q13642 323 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 LRRC73Q5JTD7 316 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 TCTE1Q5JU00 501 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 WASHC2DQ5SRD0 308 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 GCNT6Q5T4J0 391 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 OTUD1Q5VV17 481 aaPredicted RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 MFSD12Q6NUT3 480 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 CASC4Q6P4E1 433 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SLC27A1Q6PCB7 646 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 RABEPKQ7Z6M1 372 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 CNTN4Q8IWV2 1026 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 CNPY4Q8N129 248 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 LPCAT1Q8NF37 534 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 HMGCLL1Q8TB92 370 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SLC44A1Q8WWI5 657 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 OIT3Q8WWZ8 545 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SMPDL3BQ92485 455 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SNRNP40Q96DI7 357 aaKnown RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 MTERF3Q96E29 417 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF48Q96MX3 618 aaPredicted RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 SPATA33Q96N06 139 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF582Q96NG8 517 aaPredicted RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 FSD1Q9BTV5 496 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 LMF2Q9BU23 707 aaKnown RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 GTPBP2Q9BX10 602 aaKnown RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 QTRT1Q9BXR0 403 aaKnown RBP4.35□□□□□ -1.71
VPS13A-211ENST00000484581 HPF1Q9NWY4 346 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 MTUS1Q9ULD2 1270 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 RNF150Q9ULK6 438 aa4.35□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM272A0A1B0GTI8 110 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 SMIM30A4D0T7 59 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 NEMP2A6NFY4 417 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms