RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SLC9B1P1A6NJY1 282 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 QSOX1O00391 747 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 AP2A1O95782 977 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 GAS8O95995 478 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 FURINP09958 794 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 PRDX3P30048 256 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 CASRP41180 1078 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 NSG1P42857 185 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 ARCN1P48444 511 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 GSDMDP57764 484 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 LAMB3Q13751 1172 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 POU6F1Q14863 301 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 GPR19Q15760 415 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 KCTD19Q17RG1 926 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 FAM199XQ6PEV8 388 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 PRUNE1Q86TP1 453 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 RNF10Q8N5U6 811 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 SPC24Q8NBT2 197 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 PHC3Q8NDX5 983 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 SLC35B2Q8TB61 432 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 UBE2Q2Q8WVN8 375 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 ATG4AQ8WYN0 398 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 TFGQ92734 400 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 MR1Q95460 341 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 OR52A5Q9H2C5 316 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 TFB2MQ9H5Q4 396 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 LATS2Q9NRM7 1088 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 FARSAQ9Y285 508 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-208ENST00000482272 ERI2A8K979 691 aaKnown RBP13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 C2orf74A8MZ97 194 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 LIN7AO14910 233 aaPredicted RBP13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 PTPN4P29074 926 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 PDHA2P29803 388 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 PREPP48147 710 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 LMAN1P49257 510 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 CDH17Q12864 832 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 KLRB1Q12918 225 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 TCTN3Q6NUS6 607 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 FBXO38Q6PIJ6 1188 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 SYVN1Q86TM6 617 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 AMIGO1Q86WK6 493 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 CLDN19Q8N6F1 224 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 DNAAF3Q8N9W5 541 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 OR52E1Q8NGJ3 308 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 THAP4Q8WY91 577 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 CPT1BQ92523 772 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 CLIP3Q96DZ5 547 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 HES6Q96HZ4 224 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 LRFN5Q96NI6 719 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 TTC1Q99614 292 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 EPN3Q9H201 632 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 ACTL8Q9H568 366 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 AKIRIN1Q9H9L7 192 aaPredicted RBP13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 SMARCAL1Q9NZC9 954 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 SERTAD3Q9UJW9 196 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 POMT2Q9UKY4 750 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 MAN2B2Q9Y2E5 1009 aa13.06□□□□□ -0.32
CTDSP1-208ENST00000482272 MROH6A6NGR9 719 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 F8W8V4 182 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 BTN3A3O00478 584 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 ARHGAP6O43182 974 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 RFPL1O75677 317 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 FTH1P02794 183 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 MSNP26038 577 aaKnown RBP13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 PLOD1Q02809 727 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 PRKG2Q13237 762 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 SEMA5AQ13591 1074 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 ITIH4Q14624 930 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 DBN1Q16643 649 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 UGT8Q16880 541 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 SEL1L2Q5TEA6 688 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 IZUMO3Q5VZ72 239 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 HOOK3Q86VS8 718 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 APLFQ8IW19 511 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 PIANPQ8IYJ0 282 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 TEX19Q8NA77 164 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.05□□□□□ -0.323e-8■■■■■ 70.6
CTDSP1-208ENST00000482272 RUFY1Q96T51 708 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 TLR10Q9BXR5 811 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 FRMD8P1Q9BZ68 369 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 SLC7A5P2Q9GIP4 190 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 TLK1Q9UKI8 766 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 TP53TG5Q9Y2B4 290 aa13.05□□□□□ -0.32
CTDSP1-208ENST00000482272 NAV2Q8IVL1 2488 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 CCDC78A2IDD5 438 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 OR51F1A6NGY5 319 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 GOLGA6L6A8MZA4 724 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 TMEM150CB9EJG8 249 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 E7EVH7 732 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 MEN1O00255 615 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 BTN3A1O00481 513 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 KDM1AO60341 852 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 OR56A5P0C7T3 313 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 MSL3P1P0C860 447 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 PSMA3P25788 255 aa13.04□□□□□ -0.32
CTDSP1-208ENST00000482272 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms