RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 VPS37BQ9H9H4 285 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 SYTL2Q9HCH5 934 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 LHX9Q9NQ69 397 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 C1GALT1Q9NS00 363 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 KCND1Q9NSA2 647 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 CROTQ9UKG9 612 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 RARRES3Q9UL19 164 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 DRG1Q9Y295 367 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 KCNMB2Q9Y691 235 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 PRSS21Q9Y6M0 314 aa9.45□□□□□ -0.9
TMEM39A-207ENST00000482162 HEATR9A2RTY3 570 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 QSOX1O00391 747 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 LIN7AO14910 233 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 KRT86O43790 486 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 CCNYL3P0C7X3 344 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 EBLN1P0CF75 366 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 MSNP26038 577 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 RPL22P35268 128 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 PLOD1Q02809 727 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 CDH17Q12864 832 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 DNASE1L3Q13609 305 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 PLCL1Q15111 1095 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 RPS6KA1Q15418 735 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 ZRANB3Q5FWF4 1079 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 TSTD2Q5T7W7 516 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 LYPLAL1Q5VWZ2 237 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 ZNF534Q76KX8 674 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 NLRP9Q7RTR0 991 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 RASGRP3Q8IV61 690 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 APLFQ8IW19 511 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 GLIS1Q8NBF1 620 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 CT55Q8WUE5 264 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 C1orf54Q8WWF1 131 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 LCN9Q8WX39 176 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 TFGQ92734 400 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 HDAC10Q969S8 669 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 ELMO2Q96JJ3 720 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 NRTNQ99748 197 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 TLR10Q9BXR5 811 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 EIF2B3Q9NR50 452 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 PIH1D1Q9NWS0 290 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 SMARCAL1Q9NZC9 954 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 KCND3Q9UK17 655 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 GUCA1BQ9UMX6 200 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 ZKSCAN5Q9Y2L8 839 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 PCDHB3Q9Y5E6 796 aa9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 MRPS18BQ9Y676 258 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-207ENST00000482162 UBA6A0AVT1 1052 aaPredicted RBP9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 OR51F1A6NGY5 319 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 SLC9B1P1A6NJY1 282 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 H3BMH7 237 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 IFRD1O00458 451 aaPredicted RBP9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 BTN3A1O00481 513 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 SLC28A2O43868 658 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 CREG1O75629 220 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 WISP1O95388 367 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 ETS1P14921 441 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 POLR2CP19387 275 aaPredicted RBP9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 RORAP35398 523 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 GABRA4P48169 554 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 CSRP3P50461 194 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 DEFB109BQ30KR1 87 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 CCDC38Q502W7 563 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 PLEKHS1Q5SXH7 462 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 ATP1A1-AS1Q5TC04 95 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 IZUMO3Q5VZ72 239 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 ARMC6Q6NXE6 501 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 C4orf22Q6V702 233 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 ATG14Q6ZNE5 492 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 TAS2R42Q7RTR8 314 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 PRUNE1Q86TP1 453 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 AMIGO1Q86WK6 493 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 OR52E1Q8NGJ3 308 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 STAMBPL1Q96FJ0 436 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 TRAPPC9Q96Q05 1148 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 FERD3LQ96RJ6 166 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 MENTQ9BUN1 341 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 SRMSQ9H3Y6 488 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 TREX1Q9NSU2 369 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 PAK5Q9P286 719 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 SLC2A6Q9UGQ3 507 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 LNPEPQ9UIQ6 1025 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 ZNF148Q9UQR1 794 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 CDYLQ9Y232 598 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 TCAF1Q9Y4C2 921 aa9.43□□□□□ -0.9
TMEM39A-207ENST00000482162 CYSRT1A8MQ03 144 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 OR1I1O60431 355 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 GPC4O75487 556 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 SLCO2B1O94956 709 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 GOT2P00505 430 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 IFNB1P01574 187 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 FTH1P02794 183 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 NTRK1P04629 796 aa9.42□□□□□ -0.9
TMEM39A-207ENST00000482162 CAPN1P07384 714 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms