RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 KLF7O75840 302 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-212ENST00000480836 METTL18O95568 372 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 PYGMP11217 842 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 ATP1B2P14415 290 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-212ENST00000480836 GABRA4P48169 554 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 ARL4DP49703 201 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
PTPN7-212ENST00000480836 RAPSNQ13702 412 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 GSE1Q14687 1217 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 KCTD11Q693B1 232 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 TRIM73Q86UV7 250 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 CPT1CQ8TCG5 803 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 THAP4Q8WY91 577 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 DNAJC1Q96KC8 554 aaKnown RBP12.9□□□□□ -0.34
PTPN7-212ENST00000480836 LRFN5Q96NI6 719 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 FSD1LQ9BXM9 530 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 PITPNM3Q9BZ71 974 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 LACRTQ9GZZ8 138 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 PCDHGA9Q9Y5G4 932 aaKnown RBP12.9□□□□□ -0.34
PTPN7-212ENST00000480836 PCDHA3Q9Y5H8 950 aa12.9□□□□□ -0.34
PTPN7-212ENST00000480836 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 OR51F1A6NGY5 319 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 C2orf81A6NN90 581 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 TCP11X1B4DZS4 312 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 TMEM150CB9EJG8 249 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 KCNN4O15554 427 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 KRT86O43790 486 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 TPM3P06753 285 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SLC35G4P0C7Q5 338 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 CBSLP0DN79 551 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 RBP3P10745 1247 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 CDH3P22223 829 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 MC4RP32245 332 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 CTNNA1P35221 906 aaKnown RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 CBSP35520 551 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 MRPL49Q13405 166 aaKnown RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 EIF2S3LQ2VIR3 472 aaKnown RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 C11orf63Q6NUN7 778 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 JMJD6Q6NYC1 403 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SERPINA9Q86WD7 417 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 FAM20CQ8IXL6 584 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 ACVR1CQ8NER5 493 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 LCN9Q8WX39 176 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 NLNQ9BYT8 704 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SPRTNQ9H040 489 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SRMSQ9H3Y6 488 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 ARNT2Q9HBZ2 717 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 LATS2Q9NRM7 1088 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 C1GALT1Q9NS00 363 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SOHLH2Q9NX45 425 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SPHK1Q9NYA1 384 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 CRLS1Q9UJA2 301 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 ICKQ9UPZ9 632 aa12.89□□□□□ -0.35
PTPN7-212ENST00000480836 SEC16AO15027 2179 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 C17orf113A0A1B0GUU1 675 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 CCDC78A2IDD5 438 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 PJA2O43164 708 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ZNF749O43361 778 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ANXA9O76027 345 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 TMEM63AO94886 807 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 RAB40ALP0C0E4 278 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 COL8A1P27658 744 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 PGDP52209 483 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 GDF10P55107 478 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 BOP1Q14137 746 aaKnown RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 INPP5JQ15735 1006 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 DEFB110Q30KQ9 67 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 C4orf17Q53FE4 359 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ARMC6Q6NXE6 501 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 SNX20Q7Z614 316 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 SYTL1Q8IYJ3 562 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 TAB3Q8N5C8 712 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 HM13Q8TCT9 377 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 CLIP3Q96DZ5 547 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 SPATA13Q96N96 652 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 COPS8Q99627 209 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 TBL1YQ9BQ87 522 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 CCM2Q9BSQ5 444 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 HGH1Q9BTY7 390 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 TFB2MQ9H5Q4 396 aaKnown RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ACTR5Q9H9F9 607 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ZBTB20Q9HC78 741 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-212ENST00000480836 ZDHHC3Q9NYG2 299 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 COLEC10Q9Y6Z7 277 aa12.88□□□□□ -0.35
PTPN7-212ENST00000480836 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
PTPN7-212ENST00000480836 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 KLK3P07288 261 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-212ENST00000480836 ACRV1P26436 265 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms