RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SCRG1O75711 98 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 POLBP06746 335 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 APRTP07741 180 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 GDF10P55107 478 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 ACVR1Q04771 509 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 NFATC3Q12968 1075 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 SPARCL1Q14515 664 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 PTPRCAPQ14761 206 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 LINC00303Q3SY05 128 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 RNF187Q5TA31 235 aaPredicted RBP11.14□□□□□ -0.63
CCM2-213ENST00000480658 PRICKLE2Q7Z3G6 844 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 SYVN1Q86TM6 617 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 LRRC6Q86X45 466 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 GAS2L3Q86XJ1 694 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 TMEM126BQ8IUX1 230 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 PHC3Q8NDX5 983 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 OR4L1Q8NH43 312 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 OR5K2Q8NHB8 316 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 CPT1BQ92523 772 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 ELMO1Q92556 727 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 TFGQ92734 400 aaPredicted RBP11.14□□□□□ -0.63
CCM2-213ENST00000480658 N4BP2L2Q92802 583 aaPredicted RBP11.14□□□□□ -0.63
CCM2-213ENST00000480658 SLC22A18Q96BI1 424 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 PANX3Q96QZ0 392 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 FERD3LQ96RJ6 166 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 MAP3K3Q99759 626 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 RAB11FIP5Q9BXF6 653 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 LHX9Q9NQ69 397 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 RAB6BQ9NRW1 208 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 KCND1Q9NSA2 647 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 BFARQ9NZS9 450 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 FAM8A1Q9UBU6 413 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 ANAPC2Q9UJX6 822 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 ASF1AQ9Y294 204 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
CCM2-213ENST00000480658 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
CCM2-213ENST00000480658 SDK2Q58EX2 2172 aa11.14□□□□□ -0.63
CCM2-213ENST00000480658 LOC101059948A0A1B0GTJ6 334 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 MKRN2OSH3BPM6 223 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 SGTAO43765 313 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 FKBP9O95302 570 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 PAMP19021 973 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 SH3BP2P78314 561 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 DNASE1L3Q13609 305 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 BOP1Q14137 746 aaKnown RBP11.13□□□□□ -0.63
CCM2-213ENST00000480658 NAA25Q14CX7 972 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 DBN1Q16643 649 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 DNAJC21Q5F1R6 531 aaKnown RBP11.13□□□□□ -0.63
CCM2-213ENST00000480658 PCID2Q5JVF3 399 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 TSTD2Q5T7W7 516 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 IZUMO3Q5VZ72 239 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 TIPARPQ7Z3E1 657 aaKnown RBP11.13□□□□□ -0.63
CCM2-213ENST00000480658 GPR135Q8IZ08 494 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 GALNT6Q8NCL4 622 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 OR4E2Q8NGC2 313 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 OR52K1Q8NGK4 314 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 C9orf43Q8TAL5 461 aaPredicted RBP11.13□□□□□ -0.63
CCM2-213ENST00000480658 ATG4AQ8WYN0 398 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 TCTN2Q96GX1 697 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 PITPNM3Q9BZ71 974 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 SLC7A5P2Q9GIP4 190 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 ETNK1Q9HBU6 452 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 SERTAD3Q9UJW9 196 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 CROTQ9UKG9 612 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 PADI2Q9Y2J8 665 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 R3HDM2Q9Y2K5 976 aaKnown RBP11.13□□□□□ -0.63
CCM2-213ENST00000480658 TCAF1Q9Y4C2 921 aa11.13□□□□□ -0.63
CCM2-213ENST00000480658 ATMQ13315 3056 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 H3BMM5 538 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 KIF1CO43896 1103 aaKnown RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 KLHL41O60662 606 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 APOA4P06727 396 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 RAB40ALP0C0E4 278 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 EBLN1P0CF75 366 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 TPH1P17752 444 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 CYP2A7P20853 494 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 FOXN2P32314 431 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 PREPP48147 710 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 NPY2RP49146 381 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 OLIG2Q13516 323 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 KIR2DS3Q14952 304 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 ZNF658BQ4V348 819 aaPredicted RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 FAM182AQ5T1J6 154 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 MRNIPQ6NTE8 343 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 PWWP2BQ6NUJ5 590 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 UNC5DQ6UXZ4 953 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 LRRC8AQ8IWT6 810 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 EXD3Q8N9H8 876 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 OR52E1Q8NGJ3 308 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 OR13J1Q8NGT2 312 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 OR6P1Q8NGX9 317 aa11.12□□□□□ -0.63
CCM2-213ENST00000480658 GABPB2Q8TAK5 448 aaPredicted RBP11.12□□□□□ -0.63
CCM2-213ENST00000480658 MAGEC3Q8TD91 643 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms