RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PRKACAP17612 351 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 CFL1P23528 166 aaKnown RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 ATP5F1P24539 256 aaPredicted RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 GGT5P36269 586 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 CXCR4P61073 352 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 ISL1P61371 349 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 KCNC3Q14003 757 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 RFX4Q33E94 735 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 PARP15Q460N3 678 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 RBM20Q5T481 1227 aaKnown RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 STK32CQ86UX6 486 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 ZC3HC1Q86WB0 502 aaKnown RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 GJD3Q8N144 294 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 SETD9Q8NE22 299 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 VN1R2Q8NFZ6 395 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 LRRC20Q8TCA0 184 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 MCOLN3Q8TDD5 553 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 LRRC58Q96CX6 371 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 IGSF21Q96ID5 467 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 RBM4BQ9BQ04 359 aaKnown RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM175Q9BSA9 504 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 RBM4Q9BWF3 364 aaKnown RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 C1QTNF7Q9BXJ2 289 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 FZD8Q9H461 694 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 ZNF556Q9HAH1 456 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 PRMT7Q9NVM4 692 aaPredicted RBP12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 B3GNT2Q9NY97 397 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 STOML2Q9UJZ1 356 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 C3orf18Q9UK00 162 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
CNKSR3-204ENST00000479339 C2CD4BA6NLJ0 364 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 DPYSL4O14531 572 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PER2O15055 1255 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 USP12O75317 370 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PIGRP01833 764 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC4A1P02730 911 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 RAP2AP10114 183 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 HTR1EP28566 365 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 GTF2E2P29084 291 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 IL12RB1P42701 662 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC11A1P49279 550 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ZP2Q05996 745 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PIGFQ07326 219 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PLA2G4EQ3MJ16 856 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 FAM102AQ5T9C2 384 aaPredicted RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PIK3R6Q5UE93 754 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 DENND5AQ6IQ26 1287 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 LAIR2Q6ISS4 152 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 DDX53Q86TM3 631 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ZBTB8OSQ8IWT0 167 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ADHFE1Q8IWW8 467 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SYTL1Q8IYJ3 562 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 MRPL43Q8N983 215 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SMRP1Q8NCR6 262 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 GTF2H4Q92759 462 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM125Q96AQ2 219 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 MOCOSQ96EN8 888 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 DMRTB1Q96MA1 342 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 GAD1Q99259 594 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 RHOJQ9H4E5 214 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 EHD3Q9NZN3 535 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 MAGEL2Q9UJ55 1249 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC39A10Q9ULF5 831 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PCDHGB2Q9Y5G2 931 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 HSPE1-MOB4S4R3N1 261 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 HIDE1A8MVS5 230 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PTGES3LE9PB15 166 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 B4GALT5O43286 388 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 B4GALT3O60512 393 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 UGT2B17O75795 530 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 OR7A10O76100 309 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 MTHFD1P11586 935 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 CYP2F1P24903 491 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PSMB9P28065 219 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC15A1P46059 708 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ACOT2P49753 483 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 CLK1P49759 484 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 AFF1P51825 1210 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 UGT2B15P54855 530 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ZC3H12BQ5HYM0 836 aaKnown RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 ZNF470Q6ECI4 717 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 LETMD1Q6P1Q0 360 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC27A1Q6PCB7 646 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 PRR23BQ6ZRT6 265 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 CREB3L2Q70SY1 520 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 SPATC1Q76KD6 591 aa12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM173Q86WV6 379 aaPredicted RBP12.93□□□□□ -0.34
CNKSR3-204ENST00000479339 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms