RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FAF1Q9UNN5 650 aaPredicted RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 KANSL1LA0AUZ9 987 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 NPIPB15A6NHN6 443 aaPredicted RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 BMP10O95393 424 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 LDLRP01130 860 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 GSNP06396 782 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 IL7RP16871 459 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 ESRRGP62508 458 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 FOXM1Q08050 763 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 PCBP2Q15366 365 aaKnown RBP eCLIP10.6□□□□□ -0.712e-10■■■□□ 19
VPS52-217ENST00000478934 COQ5Q5HYK3 327 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 AARS2Q5JTZ9 985 aaKnown RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 SPANXN4Q5MJ08 99 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 TMTC4Q5T4D3 741 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 ELMSAN1Q6PJG2 1045 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 STK32CQ86UX6 486 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 EGFL6Q8IUX8 553 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 BBS7Q8IWZ6 715 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 MSRB3Q8IXL7 192 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 HM13Q8TCT9 377 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 VOPP1Q96AW1 172 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 PYCR2Q96C36 320 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 ZNF583Q96ND8 569 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 TMEM175Q9BSA9 504 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 LRRC3Q9BY71 257 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 SMURF2Q9HAU4 748 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 MAGEE1Q9HCI5 957 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 TIMMDC1Q9NPL8 285 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 WWOXQ9NZC7 414 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 LMCD1Q9NZU5 365 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 HACD3Q9P035 362 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 FAM8A1Q9UBU6 413 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 CIDEBQ9UHD4 219 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 CD84Q9UIB8 345 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 VPS9D1Q9Y2B5 631 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 H3BMQ9 156 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 UPK1AO00322 258 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 AREL1O15033 823 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 PFDN6O15212 129 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 MTX2O75431 263 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 TRBC1P01850 177 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 GPIP06744 558 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 CAPGP40121 348 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 SH3BGRP55822 239 aaPredicted RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 EEFSECP57772 596 aaKnown RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 BNIP3Q12983 259 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 BFSP2Q13515 415 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 ARHGEF7Q14155 803 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 KIAA0040Q15053 153 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 CPSF6Q16630 551 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS52-217ENST00000478934 CDKN3Q16667 212 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 ANKRD46Q86W74 232 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 CLEC4FQ8N1N0 589 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 LIX1Q8N485 282 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 TMBIM1Q969X1 311 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 ITCHQ96J02 903 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 NSMCE2Q96MF7 247 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 COG8Q96MW5 612 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 TSEN34Q9BSV6 310 aaKnown RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 THUMPD3Q9BV44 507 aaKnown RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 ADNPQ9H2P0 1102 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 HEBP1Q9NRV9 189 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 SLC25A37Q9NYZ2 338 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 CRLS1Q9UJA2 301 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 INTS6Q9UL03 887 aaKnown RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 ZNF490Q9ULM2 529 aaPredicted RBP10.6□□□□□ -0.71
VPS52-217ENST00000478934 ANGPTL3Q9Y5C1 460 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 U3KQV3 271 aa10.6□□□□□ -0.71
VPS52-217ENST00000478934 RAD51BO15315 384 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 SEC22BO75396 215 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 S100BP04271 92 aaPredicted RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 ENO2P09104 434 aaPredicted RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 ZNF7P17097 686 aaPredicted RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 MATN1P21941 496 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 PRKACGP22612 351 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 TUBA4AP68366 448 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 PHC1P78364 1004 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 BCL2L1Q07817 233 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 LMAN2Q12907 356 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 IMPG1Q17R60 797 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 ZBED5Q49AG3 693 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 INO80DQ53TQ3 878 aaPredicted RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 ABRAXAS1Q6UWZ7 409 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 ADAMTSL2Q86TH1 951 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 RIMKLAQ8IXN7 391 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 GFM2Q969S9 779 aaKnown RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 RHBDF1Q96CC6 855 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 MRPL9Q9BYD2 267 aaKnown RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 IFT80Q9P2H3 777 aaPredicted RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
VPS52-217ENST00000478934 BACE2Q9Y5Z0 518 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 GLYATL1P3A0A0U1RQE8 302 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 A0A1W2PQ67 120 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 MAN1A2O60476 641 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 LRATO95237 230 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 KCNH1O95259 989 aa10.59□□□□□ -0.71
VPS52-217ENST00000478934 ALDH1A1P00352 501 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms