RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 GRIK3Q13003 919 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 TBX2Q13207 712 aaPredicted RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 PRPF4BQ13523 1007 aaKnown RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 TUBB2AQ13885 445 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 CAPSQ13938 189 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 CAMK1Q14012 370 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 KRT72Q14CN4 511 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 RPE65Q16518 533 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 DPCR1Q3MIW9 517 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 DCAF4L1Q3SXM0 396 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 SLC27A1Q6PCB7 646 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 TRIM65Q6PJ69 517 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 TMEM184AQ6ZMB5 413 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 ZNF771Q7L3S4 317 aaPredicted RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 PALB2Q86YC2 1186 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 GPR65Q8IYL9 337 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 MRPL43Q8N983 215 aaKnown RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 TRIML1Q8N9V2 468 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 OR14A16Q8NHC5 309 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 TBC1D20Q96BZ9 403 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 IGSF21Q96ID5 467 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 MSTO1Q9BUK6 570 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 TUBB2BQ9BVA1 445 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 PHF7Q9BWX1 381 aaPredicted RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 UBXN6Q9BZV1 441 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 CDT1Q9H211 546 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 HSD3B7Q9H2F3 369 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 MVB12BQ9H7P6 319 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 C17orf75Q9HAS0 396 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 XPNPEP1Q9NQW7 623 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 ITM2CQ9NQX7 267 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.28□□□□□ -1.72
AFF4-208ENST00000478588 MRPL17Q9NRX2 175 aaKnown RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 TBC1D13Q9NVG8 400 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 OCIAD1Q9NX40 245 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 TRMT1Q9NXH9 659 aaKnown RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 KCND2Q9NZV8 630 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 IL36RNQ9UBH0 155 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 HOOK1Q9UJC3 728 aaKnown RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 BARX2Q9UMQ3 279 aaPredicted RBP4.28□□□□□ -1.72
AFF4-208ENST00000478588 DNAJC16Q9Y2G8 782 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 PRUNE2Q8WUY3 3088 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 MYH7BA7E2Y1 1941 aa4.28□□□□□ -1.72
AFF4-208ENST00000478588 UNC80Q8N2C7 3258 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 SF3B1O75533 1304 aaKnown RBP eCLIP4.27□□□□□ -1.732e-9■■■■■ 80.4
AFF4-208ENST00000478588 A0A1B0GUA9 196 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 ARL5CA6NH57 179 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 CCDC169A6NNP5 214 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 PI4K2BG5E9Z4 385 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 K7ERI5 159 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 STX10O60499 249 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 LDHAP00338 332 aaKnown RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 DNAJB1P25685 340 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 PBX3P40426 434 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 UBA7P41226 1012 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 MTHFRP42898 656 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 OR1G1P47890 313 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 AMTP48728 403 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 SLC11A1P49279 550 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 UBASH3AP57075 661 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 MBTD1Q05BQ5 628 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 PDCD2Q16342 344 aaPredicted RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 ZNF280DQ6N043 979 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 ANKRD54Q6NXT1 300 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 CYP26C1Q6V0L0 522 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 SYT10Q6XYQ8 523 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 ADGRD2Q7Z7M1 963 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 TMEM139Q8IV31 216 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 MLKLQ8NB16 471 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 CEP70Q8NHQ1 597 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 TMEM163Q8TC26 289 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 SNRNP27Q8WVK2 155 aaKnown RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 CALML4Q96GE6 196 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 CPB2Q96IY4 423 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 AK8Q96MA6 479 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 GAD1Q99259 594 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 ARPC5LQ9BPX5 153 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 APOL6Q9BWW8 343 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 ZBP1Q9H171 429 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 FZD8Q9H461 694 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 C6orf106Q9H6K1 298 aaPredicted RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 MINDY3Q9H8M7 445 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 SLC38A7Q9NVC3 462 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 ZNF446Q9NWS9 450 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 PSD3Q9NYI0 1048 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 LARSQ9P2J5 1176 aaKnown RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 PRG3Q9Y2Y8 225 aaPredicted RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 SRPRBQ9Y5M8 271 aaKnown RBP4.27□□□□□ -1.73
AFF4-208ENST00000478588 NCOR1O75376 2440 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 MICAL3Q7RTP6 2002 aa4.27□□□□□ -1.73
AFF4-208ENST00000478588 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
AFF4-208ENST00000478588 A0A096LPK6 155 aa4.26□□□□□ -1.73
AFF4-208ENST00000478588 VWA3AA6NCI4 1184 aa4.26□□□□□ -1.73
AFF4-208ENST00000478588 HIDE1A8MVS5 230 aa4.26□□□□□ -1.73
AFF4-208ENST00000478588 KDM4EB2RXH2 506 aaPredicted RBP4.26□□□□□ -1.73
AFF4-208ENST00000478588 LINC01565O15544 149 aa4.26□□□□□ -1.73
AFF4-208ENST00000478588 TRAPPC3O43617 180 aa4.26□□□□□ -1.73
AFF4-208ENST00000478588 TADA2AO75478 443 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms