RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 CCPG1Q9ULG6 757 aa4.59□□□□□ -1.67
LMBR1-216ENST00000477983 CNTN6Q9UQ52 1028 aa4.59□□□□□ -1.67
LMBR1-216ENST00000477983 LRCH1Q9Y2L9 728 aa4.59□□□□□ -1.67
LMBR1-216ENST00000477983 MRPL11Q9Y3B7 192 aaKnown RBP4.59□□□□□ -1.67
LMBR1-216ENST00000477983 PTGDR2Q9Y5Y4 395 aa4.59□□□□□ -1.67
LMBR1-216ENST00000477983 A0A087WV62 115 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 A0A1B0GVT2 93 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 ABHD14A-ACY1A0A1B0GW23 586 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TMEM120BA0PK00 339 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM90A18PA6NE21 464 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM90A16PA6NEW6 464 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM90A9PA6NNJ1 464 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM90A5PA8MXJ8 464 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TCP11X1B4DZS4 312 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TM9SF1O15321 606 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 DIAPH2O60879 1101 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 AKAP3O75969 853 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 RPSAP08865 295 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM90A15PP0C7V4 464 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM90A14PP0C7W9 464 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TROVE2P10155 538 aaKnown RBP eCLIP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 MARK3P27448 753 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 VHLP40337 213 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 RPL21P46778 160 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PCYT1AP49585 367 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PAPOLAP51003 745 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 HMGCS2P54868 508 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 MFAP3P55082 362 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 POLE2P56282 527 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 BACE1P56817 501 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SELENOVP59797 346 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 UBXN2AP68543 259 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 IRX4P78413 519 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 XIAPP98170 497 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 RHAGQ02094 409 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 ZBTB16Q05516 673 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 GALNT1Q10472 559 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PRPF4BQ13523 1007 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 DRAP1Q14919 205 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SHBQ15464 509 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TAF11Q15544 211 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TRADDQ15628 312 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 CCNG2Q16589 344 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 BTBD16Q32M84 506 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TRIM60Q495X7 471 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SH2D4BQ5SQS7 431 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 WDR78Q5VTH9 848 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 AAGABQ6PD74 315 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 RHBDF2Q6PJF5 856 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 CCDC25Q86WR0 208 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 VSIG1Q86XK7 387 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 CATSPER3Q86XQ3 398 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SLC13A5Q86YT5 568 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 NELFCDQ8IXH7 590 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM217AQ8IXS0 508 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FAM185AQ8N0U4 392 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 GALNT15Q8N3T1 639 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SAMD3Q8N6K7 520 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PRELID2Q8N945 189 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 HMGB4Q8WW32 186 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 CRYGNQ8WXF5 182 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 NR4A3Q92570 626 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 RSC1A1Q92681 617 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 CD101Q93033 1021 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PPP1R14BQ96C90 147 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 STAMBPL1Q96FJ0 436 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 THOC1Q96FV9 657 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 EEF2KMTQ96G04 330 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 TGS1Q96RS0 853 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SIKE1Q9BRV8 207 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FRMD8Q9BZ67 464 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 DPH5Q9H2P9 285 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 VCX3BQ9H321 246 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 ST6GALNAC4Q9H4F1 302 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 C6orf106Q9H6K1 298 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 AZI2Q9H6S1 392 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PARVGQ9HBI0 331 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 RAVER2Q9HCJ3 691 aaKnown RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 VCX3AQ9NNX9 186 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 FGFR1OP2Q9NVK5 253 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 ADAM22Q9P0K1 906 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 GTF3C4Q9UKN8 822 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PACSIN2Q9UNF0 486 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 MAGED2Q9UNF1 606 aaPredicted RBP4.58□□□□□ -1.68
LMBR1-216ENST00000477983 PKP3Q9Y446 797 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 DOCK1Q14185 1865 aa4.58□□□□□ -1.68
LMBR1-216ENST00000477983 SSC5DA1L4H1 1573 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 ASTN1O14525 1302 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 TRBV5-7A0A0A0MS05 114 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 MAGEA13PA6NCF6 341 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 C19orf81C9J6K1 198 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 FAM86B1E9PN63 330 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 PSTPIP1O43586 416 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 SMIM24O75264 130 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 FAM155BO75949 473 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 RTN3O95197 1032 aaPredicted RBP4.57□□□□□ -1.68
LMBR1-216ENST00000477983 GLUD1P00367 558 aa4.57□□□□□ -1.68
LMBR1-216ENST00000477983 SHBGP04278 402 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms