RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ITGA9Q13797 1035 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 ZNF169Q14929 603 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 RHBDD2Q6NTF9 364 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 PROKR1Q8TCW9 393 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 LCN9Q8WX39 176 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 RELTQ969Z4 430 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 PTERQ96BW5 349 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 IL17CQ9P0M4 197 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 NDOR1Q9UHB4 597 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 AP1M2Q9Y6Q5 423 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 SVILO95425 2214 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 H3BMH7 237 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 AGPSO00116 658 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 CYP1A2P05177 515 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 PYGMP11217 842 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 PVRP15151 417 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 AKT1P31749 480 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 AP1B1Q10567 949 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 CDC16Q13042 620 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 KRT33BQ14525 404 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 C1orf189Q5VU69 101 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 DET1Q7L5Y6 550 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 CPNE8Q86YQ8 564 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 PLD5Q8N7P1 536 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 DNAJB14Q8TBM8 379 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 ITLN2Q8WWU7 325 aaPredicted RBP19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 KLHL25Q9H0H3 589 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 IFT80Q9P2H3 777 aaPredicted RBP19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 FAM8A1Q9UBU6 413 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 CDYLQ9Y232 598 aa19.59■□□□□ 0.73
PDLIM1-202ENST00000477757 CCDC66A2RUB6 948 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 BTN3A3O00478 584 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 PMPCBO75439 489 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 SKILP12757 684 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 MSH3P20585 1137 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 FOXL2P58012 376 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 DCDP81605 110 aaKnown RBP19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 GSE1Q14687 1217 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 NOMO1Q15155 1222 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 BCL7AQ4VC05 210 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 FCRL6Q6DN72 434 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 MRPL14Q6P1L8 145 aaKnown RBP19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 FAM180AQ6UWF9 173 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 NACC2Q96BF6 587 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 AP1M1Q9BXS5 423 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 GLOD4Q9HC38 313 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 FBXL4Q9UKA2 621 aa19.58■□□□□ 0.72
PDLIM1-202ENST00000477757 PKDREJQ9NTG1 2253 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 OR2B3O76000 313 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 OTUD4Q01804 1114 aaKnown RBP19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 AGAP7PQ5VUJ5 663 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 PRAMEF13Q5VWM6 474 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 TMEM151BQ8IW70 566 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 NXPE1Q8N323 547 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 LILRA3Q8N6C8 439 aaPredicted RBP19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 CNDP1Q96KN2 507 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 LINC00615Q96LM1 132 aaPredicted RBP19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 AGAP4Q96P64 663 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 RNF157Q96PX1 679 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 CCM2Q9BSQ5 444 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 SLC6A20Q9NP91 592 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 HEY1Q9Y5J3 304 aa19.57■□□□□ 0.72
PDLIM1-202ENST00000477757 A0A0A6YYK5 440 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 TAS2R40P59535 323 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 SLC9A5Q14940 896 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 PDK1Q15118 436 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 TLR1Q15399 786 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 BNC2Q6ZN30 1099 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 DAAM2Q86T65 1068 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 BCORP1Q8N888 145 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 C19orf47Q8N9M1 422 aaKnown RBP19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 HM13Q8TCT9 377 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 N4BP2L2Q92802 583 aaPredicted RBP19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 OLFM3Q96PB7 478 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 TRIM8Q9BZR9 551 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 RTN4Q9NQC3 1192 aaKnown RBP19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 OLAHQ9NV23 265 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 UBP1Q9NZI7 540 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 HACD3Q9P035 362 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 CCDC88CQ9P219 2028 aa19.56■□□□□ 0.72
PDLIM1-202ENST00000477757 LOC285095A0A1B0GVY8 99 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 C2orf74A8MZ97 194 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 PPP1R12AO14974 1030 aaPredicted RBP19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 ZSCAN9O15535 394 aaPredicted RBP19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 SGTAO43765 313 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 JRKO75564 520 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 PROSCO94903 275 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 POLBP06746 335 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 GABRA4P48169 554 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 NKAIN1Q4KMZ8 207 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 SIRPB2Q5JXA9 342 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 GLT6D1Q7Z4J2 308 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 CNTRLQ7Z7A1 2325 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 PARP9Q8IXQ6 854 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 NAT14Q8WUY8 206 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 NRTNQ99748 197 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 TRIM56Q9BRZ2 755 aaKnown RBP19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 DEF6Q9H4E7 631 aa19.55■□□□□ 0.72
PDLIM1-202ENST00000477757 TFB2MQ9H5Q4 396 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms