RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 RABGGTBP53611 331 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 SPANXN2Q5MJ10 180 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 NXNL2Q5VZ03 156 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 ANKS6Q68DC2 871 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 PLPPR4Q7Z2D5 763 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 KLHDC8BQ8IXV7 354 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 ELMOD2Q8IZ81 293 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 LRRC52Q8N7C0 313 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 GRPEL2Q8TAA5 225 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 RNF34Q969K3 372 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 MRGPRX2Q96LB1 330 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 TM9SF3Q9HD45 589 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.3
DFFB-209ENST00000477548 RBM22Q9NW64 420 aaKnown RBP eCLIP13.21□□□□□ -0.3
DFFB-209ENST00000477548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.3
DFFB-209ENST00000477548 KCNH4Q9UQ05 1017 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 BTBD3Q9Y2F9 522 aa13.21□□□□□ -0.3
DFFB-209ENST00000477548 MRPL42Q9Y6G3 142 aaKnown RBP13.21□□□□□ -0.3
DFFB-209ENST00000477548 OR51F1A6NGY5 319 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 AP3D1O14617 1153 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 SGTAO43765 313 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 S1PR4O95977 384 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 HOXD8P13378 290 aaPredicted RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 CCNCP24863 283 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 PRDX3P30048 256 aaKnown RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 HUNKP57058 714 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 RBBP7Q16576 425 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 TYSND1Q2T9J0 566 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 ZC3H12BQ5HYM0 836 aaKnown RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 RANBP10Q6VN20 620 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 NUDT8Q8WV74 236 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 JPH3Q8WXH2 748 aaPredicted RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 APOL4Q9BPW4 351 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 MED10Q9BTT4 135 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 COLEC11Q9BWP8 271 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 ULBP1Q9BZM6 244 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 CLPBQ9H078 707 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 RASSF1Q9NS23 344 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 LOC100506127A0A0U1RQW1 187 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 YJEFN3A6XGL0 299 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 HBP1O60381 514 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 DFNA5O60443 496 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 WISP3O95389 354 aaPredicted RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 HLA-DQB2P05538 268 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 NPR3P17342 541 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 GADD45AP24522 165 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 FMO4P31512 558 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 LIPAP38571 399 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 WNT3AP56704 352 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 CXCR4P61073 352 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 PWP1Q13610 501 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 PLA2G4EQ3MJ16 856 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 C6orf136Q5SQH8 315 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 CADM2Q8N3J6 435 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 SPERTQ8NA61 448 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 COPS5Q92905 334 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 TNIP3Q96KP6 325 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 ZNF599Q96NL3 588 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 CCDC115Q96NT0 180 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 CITED4Q96RK1 184 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 SLA2Q9H6Q3 261 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 MARCH4Q9P2E8 410 aaPredicted RBP13.2□□□□□ -0.3
DFFB-209ENST00000477548 RAPGEFL1Q9UHV5 662 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 PAPPA2Q9BXP8 1791 aa13.2□□□□□ -0.3
DFFB-209ENST00000477548 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 NCF1BA6NI72 391 aaPredicted RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 NCF1CA8MVU1 366 aaPredicted RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 CD4P01730 458 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 NCF1P14598 390 aaPredicted RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 MRPL19P49406 292 aaKnown RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 MAP3K7CLP57077 242 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 SMU1Q2TAY7 513 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 TBRG1Q3YBR2 411 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 EFL1Q7Z2Z2 1120 aaKnown RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 SYVN1Q86TM6 617 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 HORMAD1Q86X24 394 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
DFFB-209ENST00000477548 SLC38A6Q8IZM9 456 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 ST6GAL2Q96JF0 529 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 COQ7Q99807 217 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 SIK2Q9H0K1 926 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 TAS2R9Q9NYW1 312 aa13.19□□□□□ -0.3
DFFB-209ENST00000477548 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms