RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ANKRD31Q8N7Z5 1873 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 KCTD11Q693B1 232 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 EIF3MQ7L2H7 374 aaKnown RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 CYP2U1Q7Z449 544 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 PNPT1Q8TCS8 783 aaKnown RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 PHF10Q8WUB8 498 aaKnown RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 MYDGFQ969H8 173 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 NSUN5Q96P11 429 aaKnown RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 PLEKHG4BQ96PX9 1271 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 NSUN3Q9H649 340 aaKnown RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 OR1I1O60431 355 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 NBNO60934 754 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 STC2O76061 302 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 PGLSO95336 258 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 FABP3P05413 133 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 AGTR2P50052 363 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 AP1S2P56377 157 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 SLC2A7Q6PXP3 512 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 C17orf64Q86WR6 236 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 CYP4Z2PQ8N1L4 340 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 RIMKLBQ9ULI2 386 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 DLGAP3O95886 979 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 CYP4B1P13584 511 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 SPIBQ01892 262 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 TTC9BQ8N6N2 239 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 FEM1AQ9BSK4 669 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 ARNT2Q9HBZ2 717 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 DDX28Q9NUL7 540 aaKnown RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 DAPK2Q9UIK4 370 aa14.37□□□□□ -0.11
HDAC6-220ENST00000477528 COL11A2P13942 1736 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-220ENST00000477528 MAGEB17A8MXT2 336 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 BCKDKO14874 412 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 CLCN4P51793 760 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 DGKQP52824 942 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 DIO3P55073 304 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 TRAF3Q13114 568 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 LRRC73Q5JTD7 316 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 HACD2Q6Y1H2 254 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 C11orf84Q9BUA3 381 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 EBPLQ9BY08 206 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 SOCS5O75159 536 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 NFATC1O95644 943 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 PENKP01210 267 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 FGBP02675 491 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 KRT8P05787 483 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 G6PDP11413 515 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 CCDC85BQ15834 202 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 ZNF789Q5FWF6 425 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 ZNF697Q5TEC3 545 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 PDP1Q9P0J1 537 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 KLHL3Q9UH77 587 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 MYO18AQ92614 2054 aaKnown RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 EBLN1P0CF75 366 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 RPL34P49207 117 aaKnown RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 PRKCQQ04759 706 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 CBX2Q14781 532 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 TIMM50Q3ZCQ8 353 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 RABL3Q5HYI8 236 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 C6orf136Q5SQH8 315 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 BRAT1Q6PJG6 821 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 TMEM220Q6QAJ8 160 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 RD3Q7Z3Z2 195 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 CFAP206Q8IYR0 622 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 WRAP53Q9BUR4 548 aaKnown RBP14.36□□□□□ -0.11
HDAC6-220ENST00000477528 ACAT2Q9BWD1 397 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 CXorf21Q9HAI6 301 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 MTRRQ9UBK8 725 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 AURKAO14965 403 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 IFNGR2P38484 337 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 DGKGP49619 791 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 LAPTM5Q13571 262 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 ZNF423Q2M1K9 1284 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 PIGGQ5H8A4 983 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 ANKRD49Q8WVL7 239 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 C20orf27Q9GZN8 174 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 DOCK1Q14185 1865 aa14.36□□□□□ -0.11
HDAC6-220ENST00000477528 PDLIM1O00151 329 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 PDE9AO76083 593 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 SERPINA1P01009 418 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 ENO2P09104 434 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-220ENST00000477528 OCM2P0CE71 109 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 OCMP0CE72 109 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-220ENST00000477528 TMED10P49755 219 aaKnown RBP14.35□□□□□ -0.11
HDAC6-220ENST00000477528 SMIM11AP58511 58 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 GRB7Q14451 532 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 BHLHB9Q6PI77 547 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 C11orf65Q8NCR3 313 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 SPATA5L1Q9BVQ7 753 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 C6orf62Q9GZU0 229 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-220ENST00000477528 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 PSME2Q9UL46 239 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 SMCHD1A6NHR9 2005 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 LOC730098B7Z3J9 87 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 MANBAO00462 879 aa14.35□□□□□ -0.11
HDAC6-220ENST00000477528 AQP1P29972 269 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms