RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 C9orf172C9J069 976 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 E7ESA3 106 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 BTN3A3O00478 584 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 PLD2O14939 933 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 DUX1O43812 170 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 PRAMEF10O60809 474 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 GPC4O75487 556 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 C9P02748 559 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 FTH1P02794 183 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 OGNP20774 298 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 RPS3P23396 243 aaKnown RBP eCLIP12.11□□□□□ -0.47
APTX-220ENST00000476858 ITPKBP27987 946 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 CAPZBP47756 277 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 TTPAP49638 278 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 SEPHS1P49903 392 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 MAPK10P53779 464 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 EPHA4P54764 986 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 SH3BP2P78314 561 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 GPLD1P80108 840 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 HSPA14Q0VDF9 509 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 ABRQ12979 859 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 GRB7Q14451 532 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 LONRF1Q17RB8 773 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 RBM20Q5T481 1227 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 STEAP4Q687X5 459 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 PTRHD1Q6GMV3 140 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 CAPN12Q6ZSI9 719 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 KCNMB4Q86W47 210 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
APTX-220ENST00000476858 FBXO36Q8NEA4 188 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 OR4E2Q8NGC2 313 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 OR52E1Q8NGJ3 308 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 WDR36Q8NI36 951 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 AHCYL2Q96HN2 611 aaKnown RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 RUNDC3BQ96NL0 473 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 TMEM74Q96NL1 305 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 NDNQ99608 321 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 CTRCQ99895 268 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 KIR3DX1Q9H7L2 352 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 APMAPQ9HDC9 416 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 SMYD2Q9NRG4 433 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 FBXO5Q9UKT4 447 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 ICKQ9UPZ9 632 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 PSAT1Q9Y617 370 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 APC2O95996 2303 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 CFAP47Q6ZTR5 3102 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 MN1Q10571 1320 aaPredicted RBP12.11□□□□□ -0.47
APTX-220ENST00000476858 IGHV5-51A0A0C4DH38 117 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 LIN7AO14910 233 aaPredicted RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 AMD1P17707 334 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 POLR2CP19387 275 aaPredicted RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 CARSP49589 748 aaKnown RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 KCNAB1Q14722 419 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 PLCL1Q15111 1095 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 TGIF1Q15583 401 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 HIF1AQ16665 826 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 ACSBG2Q5FVE4 666 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 AARS2Q5JTZ9 985 aaKnown RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 MRNIPQ6NTE8 343 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 IRGCQ6NXR0 463 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 WDR74Q6RFH5 385 aaPredicted RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 FAM20CQ8IXL6 584 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 SLC22A15Q8IZD6 547 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 CFAP61Q8NHU2 1237 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 USP7Q93009 1102 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 SH3KBP1Q96B97 665 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 C9orf72Q96LT7 481 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 IL17FQ96PD4 163 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 STN1Q9H668 368 aaKnown RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 SPHK1Q9NYA1 384 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
APTX-220ENST00000476858 ZC3H7BQ9UGR2 993 aaKnown RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
APTX-220ENST00000476858 OR5K3A6NET4 321 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 EFCAB7A8K855 629 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 BTN3A1O00481 513 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 KRT37O76014 449 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 DXOO77932 396 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 C1QAP02745 245 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 PKMP14618 531 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 PEBP1P30086 187 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 SLC5A2P31639 672 aa12.09□□□□□ -0.47
APTX-220ENST00000476858 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
APTX-220ENST00000476858 BDKRB1P46663 353 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms