RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 RGS4P49798 205 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 CCR3P51677 355 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 PFN3P60673 137 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 ATP6V0D1P61421 351 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 SPDYAQ5MJ70 313 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 MAML2Q8IZL2 1156 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 PTGR2Q8N8N7 351 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 ASZ1Q8WWH4 475 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 RAB3IPQ96QF0 476 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 TXLNGQ9NUQ3 528 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 A0A1W2PPC4 97 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 BIRC5O15392 142 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 MAP3K13O43283 966 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 TRIM13O60858 407 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 KERAO60938 352 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 UNC5CO95185 931 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 KITP10721 976 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 TGFBIQ15582 683 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 TTLL9Q3SXZ7 439 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 LRRTM4Q86VH4 590 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 GPSM1Q86YR5 675 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 ASB12Q8WXK4 309 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 TMEM159Q96B96 161 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 PDLIM5Q96HC4 596 aaKnown RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 HSPA12BQ96MM6 686 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 NSUN5Q96P11 429 aaKnown RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 TCEAL2Q9H3H9 227 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 COG4Q9H9E3 785 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 CARS2Q9HA77 564 aaKnown RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 MARCOQ9UEW3 520 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-217ENST00000475693 SLC17A4Q9Y2C5 497 aa17.7■□□□□ 0.42
ATG4B-217ENST00000475693 SLCO2B1O94956 709 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 GFAPP14136 432 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 ATP5F1P24539 256 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-217ENST00000475693 CCR5P51681 352 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 CDH13P55290 713 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 PPP1R3AQ16821 1122 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 PRAMEF14Q5SWL7 426 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 AMZ2Q86W34 360 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 PHC3Q8NDX5 983 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 AASDHPPTQ9NRN7 309 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 KLF15Q9UIH9 416 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 GPR34Q9UPC5 381 aa17.69■□□□□ 0.42
ATG4B-217ENST00000475693 METTL12A8MUP2 240 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PRAMEF26H0Y7S4 382 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 KRT16P08779 473 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 AK4P27144 223 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 ILF2Q12905 390 aaKnown RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 STX3Q13277 289 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 ZXDCQ2QGD7 858 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PYCR3Q53H96 274 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PLEKHS1Q5SXH7 462 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 LIPMQ5VYY2 423 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 OR56A4Q8NGH8 313 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 OR2L2Q8NH16 312 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 RHEBL1Q8TAI7 183 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 CD274Q9NZQ7 290 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PDE10AQ9Y233 779 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 WDR37Q9Y2I8 494 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PRSS38A1L453 326 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 MGAT4DA6NG13 374 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 LIN7AO14910 233 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 IPO13O94829 963 aaKnown RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 WNT1P04628 370 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 GDF5P43026 501 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 BDKRB1P46663 353 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 CSTF1Q05048 431 aaKnown RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 NFATC4Q14934 902 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 UBE2R2Q712K3 238 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-217ENST00000475693 OR6Y1Q8NGX8 325 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 ASB11Q8WXH4 323 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 TSSK1BQ9BXA7 367 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PITPNM3Q9BZ71 974 aa17.68■□□□□ 0.42
ATG4B-217ENST00000475693 PRAMEF33A0A0G2JMD5 474 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 GPR37L1O60883 481 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 TEAD1P28347 426 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 SLC1A6P48664 564 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 KPNA2P52292 529 aaKnown RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 USP39Q53GS9 565 aaKnown RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 FRA10AC1Q70Z53 315 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 HID1Q8IV36 788 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 DENND6BQ8NEG7 585 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 FAM126AQ9BYI3 521 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 TMEM168Q9H0V1 697 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 TNFRSF12AQ9NP84 129 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 L3MBTL1Q9Y468 752 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 TDRD6O60522 2096 aaKnown RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 A0A1B0GTL3 188 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 H3BM21 787 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 THEGLP0DJG4 465 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 TPBGLP0DKB5 382 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 THOP1P52888 689 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 PRKAA2P54646 552 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 DUS1LQ6P1R4 473 aaKnown RBP17.67■□□□□ 0.42
ATG4B-217ENST00000475693 LSMEM2Q8N112 164 aa17.67■□□□□ 0.42
ATG4B-217ENST00000475693 FBXO39Q8N4B4 442 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms