RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DEFA3P59666 94 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 GALK2Q01415 458 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 DLK2Q6UY11 383 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 Q6ZSR9 355 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 GALNT12Q8IXK2 581 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 UBQLNLQ8IYU4 475 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 NXF2Q9GZY0 626 aaKnown RBP18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 CCNB1IP1Q9NPC3 277 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 WDR70Q9NW82 654 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 TMEM45AQ9NWC5 275 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 UBQLN1Q9UMX0 589 aaKnown RBP18.3■□□□□ 0.52
ECHDC1-214ENST00000474289 NCF1BA6NI72 391 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 NCF1CA8MVU1 366 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 CCRL2O00421 344 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 AP3D1O14617 1153 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ENPP3O14638 875 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 RECQL4O94761 1208 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 APOA1P02647 267 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ZNF286BP0CG31 522 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 NCF1P14598 390 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 SUOXP51687 545 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 KEAP1Q14145 624 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 PON2Q15165 354 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 PRSS36Q5K4E3 855 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 EFL1Q7Z2Z2 1120 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 LIMS2Q7Z4I7 341 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ELMO1Q92556 727 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 RNF34Q969K3 372 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 NXF3Q9H4D5 531 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ATP13A1Q9HD20 1204 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 TM9SF3Q9HD45 589 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 CRNNQ9UBG3 495 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 SNX6Q9UNH7 406 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 GMPPBQ9Y5P6 360 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 A3GALT2U3KPV4 340 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ELOVL7A1L3X0 281 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 MROH6A6NGR9 719 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 CENPXA8MT69 81 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 A8MV72 311 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ECI2O75521 394 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ABCB1P08183 1280 aaPredicted RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ENDOUP21128 410 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 AKAP5P24588 427 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 TAF6P49848 677 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 RBBP7Q16576 425 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 AHSA2Q719I0 299 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 PEX5LQ8IYB4 626 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 AMER2Q8N7J2 671 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 PSD4Q8NDX1 1056 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 SIMC1Q8NDZ2 872 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 STAG3L4Q8TBR4 150 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 HCAR2Q8TDS4 363 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 KIAA1191Q96A73 305 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 ST6GAL2Q96JF0 529 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 DMRTB1Q96MA1 342 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 PLSCR3Q9NRY6 295 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 TMEM30AQ9NV96 361 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 WBP11Q9Y2W2 641 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 HSPE1-MOB4S4R3N1 261 aa18.29■□□□□ 0.52
ECHDC1-214ENST00000474289 CRYZL1O95825 349 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 LGALS2P05162 132 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 SLC2A3P11169 496 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 GADD45AP24522 165 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 RPS12P25398 132 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 TSNQ15631 228 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 CYP20A1Q6UW02 462 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 ALKAL1Q6UXT8 129 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 TAC4Q86UU9 113 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 C11orf74Q86VG3 221 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 OR10Q1Q8NGQ4 319 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 SUN5Q8TC36 379 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 NCLNQ969V3 563 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 ESAMQ96AP7 390 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 TBATAQ96M53 351 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 SIGLEC11Q96RL6 698 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 HBEGFQ99075 208 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 HEBP1Q9NRV9 189 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 DCAF13Q9NV06 445 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 EHD3Q9NZN3 535 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 GALPQ9UBC7 116 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 PCTPQ9UKL6 214 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 RNF6Q9Y252 685 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 GOLGA8CPA6NN73 597 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 GABRDO14764 452 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 MED26O95402 600 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 MSH3P20585 1137 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 PPP3CCP48454 512 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 MAD2L1BPQ15013 274 aaPredicted RBP18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 CPZQ66K79 652 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 SHQ1Q6PI26 577 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 CDYL2Q8N8U2 506 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 NUAK2Q9H093 628 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 RASSF1Q9NS23 344 aa18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 TRMT13Q9NUP7 481 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-214ENST00000474289 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms