RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 COLEC10Q9Y6Z7 277 aa18.44■□□□□ 0.54
PTCD3-210ENST00000473829 OR5K3A6NET4 321 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 NVLO15381 856 aaKnown RBP18.43■□□□□ 0.54
PTCD3-210ENST00000473829 GPC4O75487 556 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 OGNP20774 298 aaKnown RBP18.43■□□□□ 0.54
PTCD3-210ENST00000473829 NDUFS1P28331 727 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 KRT33BQ14525 404 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 MORF4L2Q15014 288 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 COL28A1Q2UY09 1125 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 ZNF470Q6ECI4 717 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 PTRHD1Q6GMV3 140 aaKnown RBP18.43■□□□□ 0.54
PTCD3-210ENST00000473829 PRSS42Q7Z5A4 293 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 IGDCC3Q8IVU1 814 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 DENND6AQ8IWF6 608 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 OR52E1Q8NGJ3 308 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 ZFPM2Q8WW38 1151 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 KCNE4Q8WWG9 221 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 C16orf45Q96MC5 204 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-210ENST00000473829 PLAC1Q9HBJ0 212 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 SIDT1Q9NXL6 827 aaKnown RBP18.43■□□□□ 0.54
PTCD3-210ENST00000473829 ACSL6Q9UKU0 697 aa18.43■□□□□ 0.54
PTCD3-210ENST00000473829 OR6C74A6NCV1 312 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 RRP8O43159 456 aaKnown RBP18.42■□□□□ 0.54
PTCD3-210ENST00000473829 SEC31AO94979 1220 aaKnown RBP18.42■□□□□ 0.54
PTCD3-210ENST00000473829 AOAHP28039 575 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 FMO4P31512 558 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 RPL21P46778 160 aaKnown RBP18.42■□□□□ 0.54
PTCD3-210ENST00000473829 SEPHS1P49903 392 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 ITGA8P53708 1063 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 HSPA14Q0VDF9 509 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 PRKG2Q13237 762 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 CRYMQ14894 314 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 BBS9Q3SYG4 887 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 ZNF449Q6P9G9 518 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 SDCCAG8Q86SQ7 713 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-210ENST00000473829 LRRC6Q86X45 466 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 SLC22A15Q8IZD6 547 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 OR4E2Q8NGC2 313 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 SNF8Q96H20 258 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 TCF12Q99081 682 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 ZNF768Q9H5H4 540 aaKnown RBP18.42■□□□□ 0.54
PTCD3-210ENST00000473829 MVB12BQ9H7P6 319 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 APMAPQ9HDC9 416 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 HRASLS2Q9NWW9 162 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 CRYL1Q9Y2S2 319 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 B3GALT1Q9Y5Z6 326 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 FAM169AQ9Y6X4 670 aa18.42■□□□□ 0.54
PTCD3-210ENST00000473829 NBEAQ8NFP9 2946 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 AHCTF1Q8WYP5 2266 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 B4E171 279 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 F8W8V4 182 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 NIPSNAP2O75323 286 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 RASSF9O75901 435 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 S1PR4O95977 384 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 TPBGLP0DKB5 382 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 PGAM1P18669 254 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 TSPAN7P41732 249 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 SLC1A2P43004 574 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 ABCG1P45844 678 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 MC2RQ01718 297 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 TLE3Q04726 772 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 CLN3Q13286 438 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 CTBP1Q13363 440 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 TGIF1Q15583 401 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 LONRF1Q17RB8 773 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 RNF187Q5TA31 235 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-210ENST00000473829 CACHD1Q5VU97 1274 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 ANKS6Q68DC2 871 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 KLHL35Q6PF15 583 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 OOSP2Q86WS3 158 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 ZFAND4Q86XD8 727 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 SPNS2Q8IVW8 549 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTCD3-210ENST00000473829 FAM136AQ96C01 138 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 ZDHHC12Q96GR4 267 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 PPM1MQ96MI6 270 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 TAAR9Q96RI9 348 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 EBNA1BP2Q99848 306 aaKnown RBP18.41■□□□□ 0.54
PTCD3-210ENST00000473829 CTRCQ99895 268 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 TSSK1BQ9BXA7 367 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 XKR8Q9H6D3 395 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 FBXO6Q9NRD1 293 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-210ENST00000473829 C20orf96Q9NUD7 363 aaPredicted RBP18.41■□□□□ 0.54
PTCD3-210ENST00000473829 SLC39A1Q9NY26 324 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 GALPQ9UBC7 116 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 ICKQ9UPZ9 632 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 ASF1AQ9Y294 204 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 SNX24Q9Y343 169 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 PCDHGA3Q9Y5H0 932 aa18.41■□□□□ 0.54
PTCD3-210ENST00000473829 PTPRQQ9UMZ3 2332 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 IGHV5-51A0A0C4DH38 117 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 EFCAB8A8MWE9 144 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 BTN3A3O00478 584 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 BTN3A1O00481 513 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 TOX3O15405 576 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 RAD51CO43502 376 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 SLCO2B1O94956 709 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 APOA4P06727 396 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 POLR2CP19387 275 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 KPNA2P52292 529 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms