RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 AGAP5A6NIR3 686 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TCP10L2B9ZVM9 353 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 H0YAE9 185 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 WRBO00258 174 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 DLGAP1O14490 977 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SOCS2O14508 198 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TOR1BO14657 336 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ABCD4O14678 606 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TGM5O43548 720 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PSTPIP1O43586 416 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 OR2B3O76000 313 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 IL6P05231 212 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CYP3A4P08684 503 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RBP1P09455 135 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF250P15622 560 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CKMT2P17540 419 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC9A1P19634 815 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 HTR1BP28222 390 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 POLR2IP36954 125 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CCR10P46092 362 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NUMBP49757 651 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RAB13P51153 203 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ACY1Q03154 408 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CDH17Q12864 832 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ABRQ12979 859 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF169Q14929 603 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ANGPT1Q15389 498 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PDSS1Q5T2R2 415 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 KIAA1614Q5VZ46 1190 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 USP51Q70EK9 711 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 C16orf62Q7Z3J2 963 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 GOT1L1Q8NHS2 421 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 LRRC15Q8TF66 581 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ST8SIA2Q92186 375 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ATOH1Q92858 354 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RAB7BQ96AH8 199 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TMCO6Q96DC7 493 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MISP3Q96FF7 219 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TRMT2BQ96GJ1 504 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ZDHHC12Q96GR4 267 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RACGAP1Q9H0H5 632 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 LDAHQ9H6V9 325 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CATSPERBQ9H7T0 1116 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SPON1Q9HCB6 807 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ACP6Q9NPH0 428 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CASS4Q9NQ75 786 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MARCH2Q9P0N8 246 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NYAP2Q9P242 653 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MKLN1Q9UL63 735 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PCDHA6Q9UN73 950 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ENTPD4Q9Y227 616 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MFHAS1Q9Y4C4 1052 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PSAT1Q9Y617 370 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ANKRD31Q8N7Z5 1873 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 A0A0A6YYJ9 748 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 LOC100653049A0A140TA62 436 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PNMA8CA0A1B0GUJ8 204 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 A0A1W2PQ45 241 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 A0A1W2PQY0 241 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 FAM92AA1XBS5 289 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CCDC182A6NF36 153 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PP2D1A8MPX8 630 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLCO1B7G3V0H7 640 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 HS6ST1O60243 411 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MED24O75448 989 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 KRT34O76011 436 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 C1QBP02746 253 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 BPGMP07738 259 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ZP3P21754 424 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TGM2P21980 687 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RBP5P82980 135 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 ADAM15Q13444 863 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PIN1Q13526 163 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CAMK1Q14012 370 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 EFR3AQ14156 821 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 MESDQ14696 234 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 FASTKD3Q14CZ7 662 aaKnown RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 POLD3Q15054 466 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CATSPEREQ5SY80 951 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 FAXCQ5TGI0 409 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 PMF1Q6P1K2 205 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 C5orf46Q6UWT4 87 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CATSPER4Q7RTX7 472 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TIGD4Q8IY51 512 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 THNSL1Q8IYQ7 743 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 RBFAQ8N0V3 343 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 EFHBQ8N7U6 833 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CLRN3Q8NCR9 226 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 IL17REQ8NFR9 667 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC13A3Q8WWT9 602 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 NELL1Q92832 810 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 TOX2Q96NM4 488 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 QKIQ96PU8 341 aaKnown RBP eCLIP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 KLF6Q99612 283 aaPredicted RBP5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 APOL6Q9BWW8 343 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 CAB39LQ9H9S4 337 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 SIX2Q9NPC8 291 aa5.05□□□□□ -1.6
TMEM39A-206ENST00000473684 USP22Q9UPT9 525 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms