RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FBXO25Q8TCJ0 367 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 ELMO1Q92556 727 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
TPM3-216ENST00000473036 CFAP36Q96G28 342 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 GFM1Q96RP9 751 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 SLC30A3Q99726 388 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 UCK1Q9HA47 277 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 IARS2Q9NSE4 1012 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 ZDHHC18Q9NUE0 388 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 MGAQ8IWI9 3026 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 IGHV5-10-1A0A0J9YXX1 117 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 UBA6A0AVT1 1052 aaPredicted RBP12.79□□□□□ -0.36
TPM3-216ENST00000473036 LILRA5A6NI73 299 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 AGRPO00253 132 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 NDUFS3O75489 264 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 HAUS5O94927 633 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 VIPP01282 170 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 C1QAP02745 245 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 PRB1P04280 392 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 OR56A5P0C7T3 313 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 PAMP19021 973 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 AOAHP28039 575 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 PLTPP55058 493 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 EIF3BP55884 814 aaKnown RBP12.79□□□□□ -0.36
TPM3-216ENST00000473036 ARL4CP56559 192 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 TLE3Q04726 772 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 TBC1D25Q3MII6 688 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 AARS2Q5JTZ9 985 aaKnown RBP12.79□□□□□ -0.36
TPM3-216ENST00000473036 SPANXN3Q5MJ09 141 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 UBAP2Q5T6F2 1119 aaKnown RBP12.79□□□□□ -0.36
TPM3-216ENST00000473036 MRNIPQ6NTE8 343 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 WDR93Q6P2C0 686 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 CNSTQ6PJW8 725 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 KCNMB4Q86W47 210 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 CNTN4Q8IWV2 1026 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 LSMEM2Q8N112 164 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 OTUD6BQ8N6M0 293 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 RCBTB1Q8NDN9 531 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 FBXO36Q8NEA4 188 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 RSC1A1Q92681 617 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 FAM136AQ96C01 138 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 C12orf66Q96MD2 445 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 DEPDC7Q96QD5 511 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 TCF12Q99081 682 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 POT1Q9NUX5 634 aa12.79□□□□□ -0.36
TPM3-216ENST00000473036 IMP3Q9NV31 184 aaKnown RBP12.79□□□□□ -0.36
TPM3-216ENST00000473036 SNRNP200O75643 2136 aaKnown RBP12.79□□□□□ -0.36
TPM3-216ENST00000473036 KLHL33A6NCF5 533 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 PIAS1O75925 651 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 ZIC2O95409 532 aaPredicted RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 CPNE6O95741 557 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 AHSGP02765 367 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 FTH1P02794 183 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 SLC2A4P14672 509 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 TYRP1P17643 537 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 TNFRSF8P28908 595 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 ECHS1P30084 290 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 PGGT1BP53609 377 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 EPHA4P54764 986 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 ADARP55265 1226 aaKnown RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 GFERP55789 205 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 BOP1Q14137 746 aaKnown RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 GBX1Q14549 363 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 C16orf72Q14CZ0 275 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 TEDDM1Q5T9Z0 273 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 TRIM48Q8IWZ4 208 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 C2CD4AQ8NCU7 369 aaPredicted RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 ZNF248Q8NDW4 579 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 CERS2Q96G23 380 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 ZNF578Q96N58 590 aaPredicted RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 SMYD2Q9NRG4 433 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 MOCS1Q9NZB8 636 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 PDP2Q9P2J9 529 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 ZC3H7BQ9UGR2 993 aaKnown RBP12.78□□□□□ -0.36
TPM3-216ENST00000473036 FBXO5Q9UKT4 447 aa12.78□□□□□ -0.36
TPM3-216ENST00000473036 KRT87PA6NCN2 255 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 LIN7AO14910 233 aaPredicted RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 EIF3HO15372 352 aaKnown RBP eCLIP12.77□□□□□ -0.37
TPM3-216ENST00000473036 ERLIN1O75477 346 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.37
TPM3-216ENST00000473036 UBXN7O94888 489 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 SLCO2B1O94956 709 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 TTC4O95801 387 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 MPOP05164 745 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 GSTM1P09488 218 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 SLC35G4P0C7Q5 338 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 THRAP10827 490 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 HGFP14210 728 aa12.77□□□□□ -0.37
TPM3-216ENST00000473036 PKMP14618 531 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms