RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 TMPRSS3P57727 454 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 GUCY2DQ02846 1103 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 CFHR1Q03591 330 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 TMEM115Q12893 351 aaPredicted RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 ILF3Q12906 894 aaKnown RBP eCLIP8.97□□□□□ -0.978e-14■■■■■ 40.3
SMC4-213ENST00000472282 C16orf72Q14CZ0 275 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 GPR33Q49SQ1 333 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PYCR3Q53H96 274 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 HP1BP3Q5SSJ5 553 aaPredicted RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 KIAA1614Q5VZ46 1190 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ARMC3Q5W041 872 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 KIAA0930Q6ICG6 404 aaPredicted RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 CRTC3Q6UUV7 619 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ZDHHC24Q6UX98 284 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 USP53Q70EK8 1073 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ZNF438Q7Z4V0 828 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 CD163Q86VB7 1156 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ZNF761Q86XN6 746 aaPredicted RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 GALNT13Q8IUC8 556 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PIANPQ8IYJ0 282 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PDIK1LQ8N165 341 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 OTUD6BQ8N6M0 293 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 OR6C4Q8NGE1 309 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 OR4L1Q8NH43 312 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 NAT14Q8WUY8 206 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PMEPA1Q969W9 287 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.97□□□□□ -0.972e-13■■■■■ 56.3
SMC4-213ENST00000472282 STAMBPL1Q96FJ0 436 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 TTC25Q96NG3 672 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 NUDT22Q9BRQ3 303 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 WDR83Q9BRX9 315 aaKnown RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 GSDMCQ9BYG8 508 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 SEMA4CQ9C0C4 833 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 CATSPERZQ9NTU4 200 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 IL1RAPL1Q9NZN1 696 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 FOXJ2Q9P0K8 574 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PISDQ9UG56 409 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ZNHIT2Q9UHR6 403 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 DMGDHQ9UI17 866 aaKnown RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 CHMP2BQ9UQN3 213 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 LOXL2Q9Y4K0 774 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 RPS6KL1Q9Y6S9 549 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PRAMEF33A0A0G2JMD5 474 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ZCWPW2A0A1B0GU75 182 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 GOLGA8KD6RF30 607 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 E7ESA3 106 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 GOLGA8TH3BQL2 631 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CHUKO15111 745 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 GRID2O43424 1007 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 VEGFDO43915 354 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 PRAMEF10O60809 474 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 USP1O94782 785 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CDK14O94921 469 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 VAPBO95292 243 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 PGAM1P18669 254 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 PAMP19021 973 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ARNTP27540 789 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CD1CP29017 333 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ALDH4A1P30038 563 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CSF2RBP32927 897 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ELK3P41970 407 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ACTR1BP42025 376 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CTSCP53634 463 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 PLTPP55058 493 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ACTR1AP61163 376 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 PDIA2Q13087 525 aaKnown RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 SEMA3AQ14563 771 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CRYMQ14894 314 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 NR1D2Q14995 579 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 FASTKD3Q14CZ7 662 aaKnown RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 AMZ1Q400G9 498 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ANKRD20A4Q4UJ75 823 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 GLE1Q53GS7 698 aaKnown RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 FASTKD1Q53R41 847 aaKnown RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 BROXQ5VW32 411 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 NKAIN2Q5VXU1 208 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 TMEM220Q6QAJ8 160 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 DET1Q7L5Y6 550 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CHST15Q7LFX5 561 aaPredicted RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 LDB1Q86U70 411 aaPredicted RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 TMEM135Q86UB9 458 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 LRRTM4Q86VH4 590 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 TRAPPC5Q8IUR0 188 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ANKMY2Q8IV38 441 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 IGDCC3Q8IVU1 814 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 RASGEF1AQ8N9B8 481 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 RCBTB1Q8NDN9 531 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 FBXO25Q8TCJ0 367 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 TTC9Q92623 222 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 ART4Q93070 314 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 CFAP36Q96G28 342 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 TMEM74Q96NL1 305 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 COPS8Q99627 209 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 EBNA1BP2Q99848 306 aaKnown RBP8.96□□□□□ -0.98
SMC4-213ENST00000472282 DPH1Q9BZG8 443 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 RMI1Q9H9A7 625 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 NEUROD4Q9HD90 331 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 TMEM9Q9P0T7 183 aa8.96□□□□□ -0.98
SMC4-213ENST00000472282 MARCH4Q9P2E8 410 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms