RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 BTN3A3O00478 584 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 GPR39O43194 453 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 NDST3O95803 873 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 SLC35G4P0C7Q5 338 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 PVRP15151 417 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 KCNK10P57789 538 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 GSE1Q14687 1217 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 SLC14A2Q15849 920 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 LONRF2Q1L5Z9 754 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 ATP13A4Q4VNC1 1196 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 VWA2Q5GFL6 755 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 GPRC6AQ5T6X5 926 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 ZNF324BQ6AW86 544 aaPredicted RBP18.38■□□□□ 0.53
SORT1-203ENST00000471996 RPUSD3Q6P087 351 aaKnown RBP18.38■□□□□ 0.53
SORT1-203ENST00000471996 ZNF295-AS1Q8N0V1 137 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 PQLC3Q8N755 202 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 OR2L2Q8NH16 312 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 LCN9Q8WX39 176 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 FAF2Q96CS3 445 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 CCDC120Q96HB5 630 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 RMDN2Q96LZ7 410 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 KLHL25Q9H0H3 589 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 SLC25A51Q9H1U9 297 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.38■□□□□ 0.53
SORT1-203ENST00000471996 FBXL4Q9UKA2 621 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 HEBP2Q9Y5Z4 205 aa18.38■□□□□ 0.53
SORT1-203ENST00000471996 KLHL33A6NCF5 533 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 LRRC53A6NM62 1247 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 BTN3A1O00481 513 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 PCDH17O14917 1159 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 OR2B3O76000 313 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 SPAM1P38567 509 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 SSR1P43307 286 aaKnown RBP18.37■□□□□ 0.53
SORT1-203ENST00000471996 SLC9A5Q14940 896 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 ASIC2Q16515 512 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 PPP2R5EQ16537 467 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 HADHQ16836 314 aaKnown RBP18.37■□□□□ 0.53
SORT1-203ENST00000471996 ZFYVE27Q5T4F4 411 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 IRAK1BP1Q5VVH5 260 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 FAM151BQ6UXP7 276 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 KCTD6Q8NC69 237 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 CEP41Q9BYV8 373 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 SPRTNQ9H040 489 aaPredicted RBP18.37■□□□□ 0.53
SORT1-203ENST00000471996 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 EPS8L2Q9H6S3 715 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 ANAPC7Q9UJX3 599 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 ZGRF1Q86YA3 2104 aa18.37■□□□□ 0.53
SORT1-203ENST00000471996 DCHS2Q6V1P9 2916 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 ALOX12BO75342 701 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 TACC2O95359 2948 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 MT-CYBP00156 380 aaPredicted RBP18.36■□□□□ 0.53
SORT1-203ENST00000471996 MSH3P20585 1137 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 PRKCIP41743 596 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 TDGF1P3P51864 188 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 PDK2Q15119 407 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 NKAIN1Q4KMZ8 207 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 DET1Q7L5Y6 550 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 SPATA22Q8NHS9 363 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 N4BP2L2Q92802 583 aaPredicted RBP18.36■□□□□ 0.53
SORT1-203ENST00000471996 ZNF830Q96NB3 372 aaPredicted RBP18.36■□□□□ 0.53
SORT1-203ENST00000471996 TRIM56Q9BRZ2 755 aaKnown RBP18.36■□□□□ 0.53
SORT1-203ENST00000471996 TRABDQ9H4I3 376 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 FAM60AQ9NP50 221 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 AIPL1Q9NZN9 384 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 IL17CQ9P0M4 197 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 DHCR7Q9UBM7 475 aaKnown RBP18.36■□□□□ 0.53
SORT1-203ENST00000471996 FAM8A1Q9UBU6 413 aa18.36■□□□□ 0.53
SORT1-203ENST00000471996 GLYATL1P3A0A0U1RQE8 302 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 POLBP06746 335 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 PYGMP11217 842 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 MMP11P24347 488 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 SSTR2P30874 369 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 ITGA9Q13797 1035 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 PRKD1Q15139 912 aaPredicted RBP18.35■□□□□ 0.53
SORT1-203ENST00000471996 E4F1Q66K89 784 aaPredicted RBP18.35■□□□□ 0.53
SORT1-203ENST00000471996 RPTNQ6XPR3 784 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 APTXQ7Z2E3 356 aaKnown RBP18.35■□□□□ 0.53
SORT1-203ENST00000471996 MAP7D3Q8IWC1 876 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 CATSPER1Q8NEC5 780 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 LINC00615Q96LM1 132 aaPredicted RBP18.35■□□□□ 0.53
SORT1-203ENST00000471996 NRTNQ99748 197 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 LHPPQ9H008 270 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 SMOXQ9NWM0 555 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 PKDREJQ9NTG1 2253 aa18.35■□□□□ 0.53
SORT1-203ENST00000471996 TRGV8A0A0C4DH27 118 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 C2orf74A8MZ97 194 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 GAPDHSO14556 408 aaPredicted RBP18.34■□□□□ 0.53
SORT1-203ENST00000471996 HCRTR1O43613 425 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 CAPN3P20807 821 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 AKT1P31749 480 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 GJC1P36383 396 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 KRTAP10-9P60411 292 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 AP1B1Q10567 949 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 MTFR2Q6P444 385 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 CFAP206Q8IYR0 622 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 LILRA3Q8N6C8 439 aaPredicted RBP18.34■□□□□ 0.53
SORT1-203ENST00000471996 C19orf47Q8N9M1 422 aaKnown RBP18.34■□□□□ 0.53
SORT1-203ENST00000471996 NR4A3Q92570 626 aa18.34■□□□□ 0.53
SORT1-203ENST00000471996 FERD3LQ96RJ6 166 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms