RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GLIPR1L2Q4G1C9 344 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 ZNF774Q6NX45 483 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 PAQR6Q6TCH4 344 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 PIGZQ86VD9 579 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 TICAM1Q8IUC6 712 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 MARVELD2Q8N4S9 558 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 TBC1D16Q8TBP0 767 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 FOXN4Q96NZ1 517 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 KRT12Q99456 494 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 FAM120CQ9NX05 1096 aaKnown RBP3.98□□□□□ -1.77
CD46-213ENST00000471987 ERAP1Q9NZ08 941 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 AMACRQ9UHK6 382 aa3.98□□□□□ -1.77
CD46-213ENST00000471987 LOC101059948A0A1B0GTJ6 334 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 PRSS51A0A1B0GVH4 220 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 KPNA7A9QM74 516 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 E9PI62 339 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 NXPH2O95156 264 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 NMBRP28336 390 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 CAMPP49913 170 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 IKQ13123 557 aaPredicted RBP3.97□□□□□ -1.77
CD46-213ENST00000471987 ASTE1Q2TB18 679 aaPredicted RBP3.97□□□□□ -1.77
CD46-213ENST00000471987 C2CD6Q53TS8 623 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 LMNTD2Q8IXW0 634 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 TEX11Q8IYF3 940 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 DCLK2Q8N568 766 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 KBTBD8Q8NFY9 601 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 OR4C3Q8NH37 302 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 FAM81BQ96LP2 452 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 NSMCE3Q96MG7 304 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 GPATCH1Q9BRR8 931 aaKnown RBP3.97□□□□□ -1.77
CD46-213ENST00000471987 DIAPH3Q9NSV4 1193 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 TAB2Q9NYJ8 693 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 PGAP2Q9UHJ9 254 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 SESN1Q9Y6P5 492 aa3.97□□□□□ -1.77
CD46-213ENST00000471987 SOS1Q07889 1333 aaPredicted RBP3.96□□□□□ -1.77
CD46-213ENST00000471987 A8MZ25 164 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 UGT1A4P22310 534 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 CA6P23280 308 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 HNF4AP41235 474 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 GSDMDP57764 484 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 DRP2Q13474 957 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 GRAPQ13588 217 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 HLA-BQ31612 363 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 WLSQ5T9L3 541 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 INTS11Q5TA45 600 aaKnown RBP3.96□□□□□ -1.78
CD46-213ENST00000471987 IL27RAQ6UWB1 636 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 TMTC3Q6ZXV5 915 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 SCYL3Q8IZE3 742 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 NIPA2Q8N8Q9 360 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 PCYOX1LQ8NBM8 494 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 IL17REQ8NFR9 667 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 OR5AP2Q8NGF4 316 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 OLIG1Q8TAK6 271 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 MUC13Q9H3R2 512 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 OSGIN1Q9UJX0 560 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 TP53TG3Q9ULZ0 132 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 WDR37Q9Y2I8 494 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 RIPK3Q9Y572 518 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 PCDHGA5Q9Y5G8 931 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 LYVE1Q9Y5Y7 322 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 PIAS3Q9Y6X2 628 aa3.96□□□□□ -1.78
CD46-213ENST00000471987 MSGN1A6NI15 193 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 AGR2O95994 175 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 GPIP06744 558 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 CA4P22748 312 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 PPARGP37231 505 aaPredicted RBP3.95□□□□□ -1.78
CD46-213ENST00000471987 HUNKP57058 714 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 MS4A2Q01362 244 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 RAPSNQ13702 412 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 NECTIN1Q15223 517 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 TAF1BQ53T94 588 aaPredicted RBP3.95□□□□□ -1.78
CD46-213ENST00000471987 TMEM154Q6P9G4 183 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 FIP1L1Q6UN15 594 aaKnown RBP3.95□□□□□ -1.78
CD46-213ENST00000471987 OMA1Q96E52 524 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 USP28Q96RU2 1077 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 LRRC61Q9BV99 259 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 UPF3AQ9H1J1 476 aaKnown RBP3.95□□□□□ -1.78
CD46-213ENST00000471987 PAG1Q9NWQ8 432 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 ZDHHC2Q9UIJ5 367 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 GTF2A1LQ9UNN4 478 aa3.95□□□□□ -1.78
CD46-213ENST00000471987 AGRNO00468 2067 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 TO15178 435 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 RNASEH2AO75792 299 aaKnown RBP3.94□□□□□ -1.78
CD46-213ENST00000471987 CLDN1O95832 211 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 RARGP13631 454 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 PTGER3P43115 390 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 HERV-K104P61576 105 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 CX3CL1P78423 397 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 PNRC1Q12796 327 aaPredicted RBP3.94□□□□□ -1.78
CD46-213ENST00000471987 ELAVL2Q12926 359 aaKnown RBP3.94□□□□□ -1.78
CD46-213ENST00000471987 MDH1BQ5I0G3 518 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 GRTP1Q5TC63 336 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 KLHL35Q6PF15 583 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 PXKQ7Z7A4 578 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 LACC1Q8IV20 430 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 MCEMP1Q8IX19 187 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 MAPKAPK5-AS1Q8N8E1 139 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 RNF128Q8TEB7 428 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 PKNOX2Q96KN3 472 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms