RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PDPK2PQ6A1A2 396 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TXNRD3NBQ6F5E7 133 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 ISLR2Q6UXK2 745 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TTLL10Q6ZVT0 673 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 NCCRP1Q6ZVX7 275 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 CYP4V2Q6ZWL3 525 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 Q71RC1 249 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 C11orf96Q7Z7L8 435 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 PSTKQ8IV42 348 aaKnown RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 CFAP206Q8IYR0 622 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TEX26Q8N6G2 289 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 ANKRD20A12PQ8NF67 263 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 SUN3Q8TAQ9 357 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 ARRDC2Q8TBH0 407 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC110Q8TBZ0 833 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 COG1Q8WTW3 980 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 NR4A3Q92570 626 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 MTFMTQ96DP5 389 aaKnown RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 MAGED4Q96JG8 741 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 BTBD6Q96KE9 485 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 AGAP3Q96P47 875 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 LYSMD1Q96S90 227 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 HGH1Q9BTY7 390 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 AP1M1Q9BXS5 423 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 KIR3DX1Q9H7L2 352 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TINAGQ9UJW2 476 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 POMT2Q9UKY4 750 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 RPL26L1Q9UNX3 145 aaKnown RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 DCHS2Q6V1P9 2916 aa6.65□□□□□ -1.35
HDAC1-204ENST00000471488 SPTBP11277 2137 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 C2orf74A8MZ97 194 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 BTN3A3O00478 584 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 PCDH17O14917 1159 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 AURKAO14965 403 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 ZSCAN9O15535 394 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 CNOT3O75175 753 aaKnown RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 KLHL18O94889 574 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 RASAL1O95294 804 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 CLDN14O95500 239 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 FTLP02792 175 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 CTSBP07858 339 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 CCDC172P0C7W6 258 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 EEF1GP26641 437 aaKnown RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 CA7P43166 264 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 KIR3DL1P43629 444 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 DCDC1P59894 354 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 PMP22Q01453 160 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 UBXN1Q04323 297 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 AP1B1Q10567 949 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 NOMO1Q15155 1222 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 IFI16Q16666 785 aaKnown RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 LONRF2Q1L5Z9 754 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 BOLA3Q53S33 107 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 TFDP3Q5H9I0 405 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 LDLRAP1Q5SW96 308 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 XKRXQ6PP77 449 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 C3P1Q6ZMU1 363 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 DAAM2Q86T65 1068 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 RAVER1Q8IY67 606 aaKnown RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 SLC25A41Q8N5S1 370 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 SIRT6Q8N6T7 355 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 C19orf47Q8N9M1 422 aaKnown RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 KCTD6Q8NC69 237 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 PHC3Q8NDX5 983 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 BRSK1Q8TDC3 778 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 BLOC1S5Q8TDH9 187 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 ZFPM2Q8WW38 1151 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 RMDN2Q96LZ7 410 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF830Q96NB3 372 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 TAAR6Q96RI8 345 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 REPIN1Q9BWE0 567 aaKnown RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 YIPF2Q9BWQ6 316 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 TSPAN10Q9H1Z9 355 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-204ENST00000471488 MCCC2Q9HCC0 563 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 ZNF160Q9HCG1 818 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 SYTL2Q9HCH5 934 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 ACTR10Q9NZ32 417 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 TMPRSS11EQ9UL52 423 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 HEY1Q9Y5J3 304 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 SPO11Q9Y5K1 396 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 AP1M2Q9Y6Q5 423 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 SCINQ9Y6U3 715 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 CCDC88CQ9P219 2028 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 PKDREJQ9NTG1 2253 aa6.64□□□□□ -1.35
HDAC1-204ENST00000471488 TRAV17A0A0B4J275 112 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 GLYATL1P3A0A0U1RQE8 302 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MGAT4DA6NG13 374 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MATN2O00339 956 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 IFRD1O00458 451 aaPredicted RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 FANCGO15287 622 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ZNHIT1O43257 154 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 HCRTR1O43613 425 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 SLC19A2O60779 497 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 KCNJ13O60928 360 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 CRYABP02511 175 aaKnown RBP6.63□□□□□ -1.35
HDAC1-204ENST00000471488 MMP2P08253 660 aa6.63□□□□□ -1.35
HDAC1-204ENST00000471488 ATP1A3P13637 1013 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms