RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RUFY1Q96T51 708 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 CCM2Q9BSQ5 444 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 CEP41Q9BYV8 373 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 KIR3DX1Q9H7L2 352 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 ACTR5Q9H9F9 607 aaPredicted RBP8.88□□□□□ -0.99
CPSF4-211ENST00000471455 BPIFA1Q9NP55 256 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 IL26Q9NPH9 171 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 C1GALT1Q9NS00 363 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 SLC24A2Q9UI40 661 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 SERTAD3Q9UJW9 196 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 PSMD13Q9UNM6 376 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 SPO11Q9Y5K1 396 aa8.88□□□□□ -0.99
CPSF4-211ENST00000471455 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TNRC6AQ8NDV7 1962 aaKnown RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 SERTM1A2A2V5 107 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 OR6C74A6NCV1 312 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 PEX12O00623 359 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 ZNF185O15231 689 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 MT-CYBP00156 380 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TPM3P06753 285 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 MSL3P1P0C860 447 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 HADHAP40939 763 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 PREPP48147 710 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 CTSCP53634 463 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 WNT3AP56704 352 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TNP2Q05952 138 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TFDP2Q14188 446 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 NFE2L1Q14494 772 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 NCF4Q15080 339 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 ZRANB3Q5FWF4 1079 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 FNBP1LQ5T0N5 605 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 LRRC38Q5VT99 294 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 HIST2H2BCQ6DN03 193 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 ZNF449Q6P9G9 518 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 HOOK3Q86VS8 718 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 SYTL1Q8IYJ3 562 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 GPR135Q8IZ08 494 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 CLEC1AQ8NC01 280 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 ACVR1CQ8NER5 493 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 OR2L2Q8NH16 312 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 SPATA22Q8NHS9 363 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 BLOC1S5Q8TDH9 187 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 HEXDCQ8WVB3 486 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 N4BP2L2Q92802 583 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 DCUN1D1Q96GG9 259 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TEKT5Q96M29 485 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 NAP1L5Q96NT1 182 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 VAT1Q99536 393 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 SMAD5Q99717 465 aaKnown RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 FERMT1Q9BQL6 677 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 FSD1LQ9BXM9 530 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 ILKAPQ9H0C8 392 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 WWP1Q9H0M0 922 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 SRMSQ9H3Y6 488 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 DEF6Q9H4E7 631 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 VPS37BQ9H9H4 285 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 DDX56Q9NY93 547 aaKnown RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 IL17CQ9P0M4 197 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 KLHL8Q9P2G9 620 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-211ENST00000471455 POMT2Q9UKY4 750 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 TMPRSS11EQ9UL52 423 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 CAPN11Q9UMQ6 739 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 SLC5A6Q9Y289 635 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 CENPEQ02224 2701 aa8.87□□□□□ -0.99
CPSF4-211ENST00000471455 MED13Q9UHV7 2174 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 LOC285095A0A1B0GVY8 99 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 GSAPA4D1B5 854 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 A6NL46 340 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 C2orf81A6NN90 581 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 TMEM150CB9EJG8 249 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 E7EQ34 232 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 IFRD1O00458 451 aaPredicted RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 AURKAO14965 403 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 STX7O15400 261 aaKnown RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 PRAMEF1O95521 474 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 TMEM253P0C7T8 217 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 FAM157BP0CG42 384 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 PTPN3P26045 913 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 RORAP35398 523 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 ANP32AP39687 249 aaKnown RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 KPNA2P52292 529 aaKnown RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 ITGA1P56199 1179 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 PER3P56645 1201 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 DYNLT1P63172 113 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 MPP3Q13368 585 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 MRPL49Q13405 166 aaKnown RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 MESDQ14696 234 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 SLC18A3Q16572 532 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 KYNUQ16719 465 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 EIF2S3LQ2VIR3 472 aaKnown RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 BCL7AQ4VC05 210 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 SIRPB2Q5JXA9 342 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 PLEKHS1Q5SXH7 462 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 SAMD5Q5TGI4 173 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 FAM198BQ6UWH4 519 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 CERS6Q6ZMG9 384 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 FAM83HQ6ZRV2 1179 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms