RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TFB2MQ9H5Q4 396 aaKnown RBP9.65□□□□□ -0.86
SF3A1-207ENST00000471342 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 SLC6A14Q9UN76 642 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 DNAJC16Q9Y2G8 782 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 PIKFYVEQ9Y2I7 2098 aa9.65□□□□□ -0.87
SF3A1-207ENST00000471342 TMEM120BA0PK00 339 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 NPEPPSL1A6NEC2 478 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 OR52A4PA6NMU1 304 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PRR5-ARHGAP8B1AHC4 643 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 LMO7DNF2Z398 122 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 MYO1CO00159 1063 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 QSOX1O00391 747 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PPM1DO15297 605 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 MAGEC1O60732 1142 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 SDC3O75056 442 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TNFP01375 233 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 RETP07949 1114 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 MYF5P13349 255 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TFEBP19484 476 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 HTR1BP28222 390 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 EPHA8P29322 1005 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PBLDP30039 288 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PEBP1P30086 187 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 GGT5P36269 586 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PPARGP37231 505 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PLA2G5P39877 138 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 THOP1P52888 689 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 YBX1P67809 324 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 CFHR1Q03591 330 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ABRQ12979 859 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 LRP8Q14114 963 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PCLAFQ15004 111 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ACAP2Q15057 778 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 SF3A2Q15428 464 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TCEA2Q15560 299 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 N4BP2L1Q5TBK1 243 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 LAIR1Q6GTX8 287 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 LRRC8EQ6NSJ5 796 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 UGT3A1Q6NUS8 523 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 MBOAT1Q6ZNC8 495 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PRR23BQ6ZRT6 265 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 CEP68Q76N32 757 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ASCL5Q7RTU5 278 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 RD3Q7Z3Z2 195 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 LSMEM2Q8N112 164 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 OR5AR1Q8NGP9 310 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ASZ1Q8WWH4 475 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 APOPT1Q96IL0 206 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PKP4Q99569 1192 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TTC1Q99614 292 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TMEM79Q9BSE2 394 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ZCCHC2Q9C0B9 1178 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 SYNPO2LQ9H987 977 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 RDH14Q9HBH5 336 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 SARS2Q9NP81 518 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TNFRSF12AQ9NP84 129 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 DNAAF2Q9NVR5 837 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 OGFRQ9NZT2 677 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 SIRPGQ9P1W8 387 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 APOBEC3BQ9UH17 382 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 TRMT6Q9UJA5 497 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF225Q9UK10 706 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PTBP2Q9UKA9 531 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 PSMD13Q9UNM6 376 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 BTBD3Q9Y2F9 522 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 CFAP20Q9Y6A4 193 aaKnown RBP9.64□□□□□ -0.87
SF3A1-207ENST00000471342 CSNK1G3Q9Y6M4 447 aa9.64□□□□□ -0.87
SF3A1-207ENST00000471342 KLHL33A6NCF5 533 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 HMGB1P1B2RPK0 211 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 PPP6CO00743 305 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 CBFA2T3O75081 653 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 GSTA1P08263 222 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF806P0C7X5 589 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 RALBP11234 206 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ENO3P13929 434 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 CD59P13987 128 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ENGP17813 658 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 XRCC1P18887 633 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 KRT15P19012 456 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 BDKRB1P46663 353 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 SLC6A12P48065 614 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 GLRBP48167 497 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 AGTR2P50052 363 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 IL2P60568 153 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 PDAP1Q13442 181 aaKnown RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 E2F2Q14209 437 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 FASTKQ14296 549 aaKnown RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 NR1D2Q14995 579 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 TRIM61Q5EBN2 209 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 PRRT3Q5FWE3 981 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 LGSNQ5TDP6 509 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 SLC30A9Q6PML9 568 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 OTOAQ7RTW8 1153 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 GATAD2AQ86YP4 633 aa9.63□□□□□ -0.87
SF3A1-207ENST00000471342 NKAPQ8N5F7 415 aaKnown RBP9.63□□□□□ -0.87
SF3A1-207ENST00000471342 PDPRQ8NCN5 879 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms