RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PDE7BQ9NP56 450 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
HMGN1-211ENST00000471260 SLC24A2Q9UI40 661 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 TUBD1Q9UJT1 453 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 R3HDM2Q9Y2K5 976 aaKnown RBP13.17□□□□□ -0.3
HMGN1-211ENST00000471260 KALRNO60229 2985 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 TLCD2A6NGC4 264 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 CCDC188H7C350 402 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 ZNF185O15231 689 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 AP2A2O94973 939 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 SYF2O95926 243 aaKnown RBP13.16□□□□□ -0.3
HMGN1-211ENST00000471260 ITGB6P18564 788 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 FDFT1P37268 417 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 SH3BP2P78314 561 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 CYP4F2P78329 520 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 CDH17Q12864 832 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 RPA4Q13156 261 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 KRT33BQ14525 404 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 OASLQ15646 514 aaKnown RBP13.16□□□□□ -0.3
HMGN1-211ENST00000471260 ZRANB3Q5FWF4 1079 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 ARMC6Q6NXE6 501 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-211ENST00000471260 SERPINA9Q86WD7 417 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 SIDT2Q8NBJ9 832 aaKnown RBP13.16□□□□□ -0.3
HMGN1-211ENST00000471260 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 HRASLS2Q9NWW9 162 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 RIMKLBQ9ULI2 386 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 RPS6KL1Q9Y6S9 549 aa13.16□□□□□ -0.3
HMGN1-211ENST00000471260 IGHV5-51A0A0C4DH38 117 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 TCRBV7S2A1N4TA0A589 114 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 UBA6A0AVT1 1052 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-211ENST00000471260 J3QKU1 62 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 IFRD1O00458 451 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-211ENST00000471260 LIASO43766 372 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 SPAG6O75602 509 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 SUN1O94901 812 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 RECKO95980 971 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 CCNYL3P0C7X3 344 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 TPH1P17752 444 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 NSG1P42857 185 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 CCR10P46092 362 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 HSD11B2P80365 405 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 CUL1Q13616 776 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 ITIH4Q14624 930 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 POU6F1Q14863 301 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 SLC13A5Q86YT5 568 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-211ENST00000471260 D2HGDHQ8N465 521 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 DNAAF3Q8N9W5 541 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 ACVR1CQ8NER5 493 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-211ENST00000471260 OR8K5Q8NH50 307 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 ACTRT1Q8TDG2 376 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 PEX13Q92968 403 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 STAMBPL1Q96FJ0 436 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 TTC1Q99614 292 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 MAP3K3Q99759 626 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 FAM107BQ9H098 131 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 FAM96AQ9H5X1 160 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 COG4Q9H9E3 785 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 KCND3Q9UK17 655 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 RARRES3Q9UL19 164 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 PCDHB3Q9Y5E6 796 aa13.15□□□□□ -0.3
HMGN1-211ENST00000471260 CFAP20Q9Y6A4 193 aaKnown RBP13.15□□□□□ -0.3
HMGN1-211ENST00000471260 HEATR9A2RTY3 570 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 F8W8V4 182 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 KIAA0754O94854 1291 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-211ENST00000471260 POLBP06746 335 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 ZNF28P17035 718 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 TCN2P20062 427 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 ARL4DP49703 201 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 HNRNPH2P55795 449 aaKnown RBP13.14□□□□□ -0.31
HMGN1-211ENST00000471260 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-211ENST00000471260 CDC20Q12834 499 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 TUBB3Q13509 450 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 SEPT6Q14141 434 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 ZNF658BQ4V348 819 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-211ENST00000471260 TMTC4Q5T4D3 741 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 LYPLAL1Q5VWZ2 237 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 NLRP9Q7RTR0 991 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 STARD8Q92502 1023 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.14□□□□□ -0.31
HMGN1-211ENST00000471260 SGSM3Q96HU1 749 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 RMDN2Q96LZ7 410 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 RANBP9Q96S59 729 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 OR52A5Q9H2C5 316 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 MVB12BQ9H7P6 319 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
HMGN1-211ENST00000471260 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms