RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 OLIG1Q8TAK6 271 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 FGFBP3Q8TAT2 258 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 TBC1D16Q8TBP0 767 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 MRGPRDQ8TDS7 321 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 GRHL3Q8TE85 626 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 FAM222BQ8WU58 562 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 HSD17B8Q92506 261 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 MTERF3Q96E29 417 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 PGAM5Q96HS1 289 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 CEP295NLQ96MC4 621 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 CMTM3Q96MX0 182 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 IWS1Q96ST2 819 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 SYT11Q9BT88 431 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 TRAF4Q9BUZ4 470 aaPredicted RBP1.26□□□□□ -2.21
UBXN4-207ENST00000471246 C1QTNF1Q9BXJ1 281 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 HHATLQ9HCP6 504 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 ACKR4Q9NPB9 350 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 KRT84Q9NSB2 600 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 OLA1Q9NTK5 396 aaKnown RBP1.26□□□□□ -2.21
UBXN4-207ENST00000471246 NPAP1Q9NZP6 1156 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 FLRT3Q9NZU0 649 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 RHCGQ9UBD6 479 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 AASSQ9UDR5 926 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 FBXL17Q9UF56 701 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 AMACRQ9UHK6 382 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 OSGIN1Q9UJX0 560 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 PNMA2Q9UL42 364 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 NENFQ9UMX5 172 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 PCDHGA5Q9Y5G8 931 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 HCFC1P51610 2035 aa1.26□□□□□ -2.21
UBXN4-207ENST00000471246 MYH14Q7Z406 1995 aaKnown RBP1.26□□□□□ -2.21
UBXN4-207ENST00000471246 TDRD9Q8NDG6 1382 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SOS1Q07889 1333 aaPredicted RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 IGLV7-46A0A075B6I9 117 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 LOC101059948A0A1B0GTJ6 334 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 A0A1W2PN81 502 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 LNP1A1A4G5 178 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ELOVL7A1L3X0 281 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CDRT15L2A8MXV6 281 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 MYO1GB0I1T2 1018 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 E9PI62 339 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 GAPDHSO14556 408 aaPredicted RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 TO15178 435 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 RSL1D1O76021 490 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 MBD4O95243 580 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 DUS4LO95620 317 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CLDN1O95832 211 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 GPIP06744 558 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CLTBP09497 229 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ACADMP11310 421 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 MMP9P14780 707 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CEBPBP17676 345 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 EFNA1P20827 205 aaPredicted RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CA4P22748 312 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CHRNA7P36544 502 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 GARSP41250 739 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 PDX1P52945 283 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 B3GALT5-AS1P59052 145 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SETQ01105 290 aaPredicted RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CDR2Q01850 454 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 PRKCZQ05513 592 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 DMPKQ09013 629 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ENPP2Q13822 863 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 KCNC3Q14003 757 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 MELKQ14680 651 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CRYMQ14894 314 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 DLG2Q15700 870 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ZNF239Q16600 458 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CTU2Q2VPK5 515 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 XKR6Q5GH73 641 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 TCTE1Q5JU00 501 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CYP4A22Q5TCH4 519 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SPINK14Q6IE38 97 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 LINGO4Q6UY18 593 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 CHST9Q7L1S5 443 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 PIGZQ86VD9 579 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 P2RY8Q86VZ1 359 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SPAG16Q8N0X2 631 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 OR4C3Q8NH37 302 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SCFD2Q8WU76 684 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ZNRF4Q8WWF5 429 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 HPSE2Q8WWQ2 592 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SUSD6Q92537 303 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 FAM81BQ96LP2 452 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SGK494Q96LW2 274 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 PKP2Q99959 881 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 SYT15Q9BQS2 421 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 FGFBP2Q9BYJ0 223 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 FTOQ9C0B1 505 aaKnown RBP eCLIP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 VN1R1Q9GZP7 353 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 LAT2Q9GZY6 243 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 P2RY12Q9H244 342 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ARRDC1-AS1Q9H2J1 176 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 A4GALTQ9NPC4 353 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 INTS9Q9NV88 658 aaKnown RBP1.25□□□□□ -2.21
UBXN4-207ENST00000471246 OSER1Q9NX31 292 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 RNF186Q9NXI6 227 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 ASIC3Q9UHC3 531 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 RIPK3Q9Y572 518 aa1.25□□□□□ -2.21
UBXN4-207ENST00000471246 GON4LQ3T8J9 2241 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms