RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FRMD1Q8N878 549 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 SETD7Q8WTS6 366 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 UBTD2Q8WUN7 234 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 ANKRD49Q8WVL7 239 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 C10orf82Q8WW14 230 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 ASZ1Q8WWH4 475 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 GLMNQ92990 594 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 FUBP1Q96AE4 644 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 SIPA1Q96FS4 1042 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 MAGEB10Q96LZ2 347 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 SMIM14Q96QK8 99 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 MECRQ9BV79 373 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 RIOK2Q9BVS4 552 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 GATA5Q9BWX5 397 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 ABCG8Q9H221 673 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 CD248Q9HCU0 757 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 PFDN4Q9NQP4 134 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 WSB2Q9NYS7 404 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 DNMT3AQ9Y6K1 912 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 URB1O60287 2271 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 WDR91A4D1P6 747 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 TRPC5OSA6NMA1 111 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 METTL12A8MUP2 240 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 LIN7AO14910 233 aaPredicted RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 SLC22A2O15244 555 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 RAD51BO15315 384 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PLRG1O43660 514 aaKnown RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 ZBTB14O43829 449 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 LZTS3O60299 673 aaPredicted RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 NIPSNAP2O75323 286 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 ATP5HO75947 161 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 TM7SF2O76062 418 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 SLCO2B1O94956 709 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 SLC25A14O95258 325 aaPredicted RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 HSPA4LO95757 839 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 CAPNS1P04632 268 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 GM2AP17900 193 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 UGT1A6P19224 532 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 UGT1A1P22309 533 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 UGT1A4P22310 534 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 AKT1P31749 480 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 UGT1A3P35503 534 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 UGT1A5P35504 534 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 CDKN1CP49918 316 aaPredicted RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 HNMTP50135 292 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 AFF3P51826 1226 aaKnown RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 COPAP53621 1224 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 B4GALNT1Q00973 533 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 GRIK2Q13002 908 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 RPA4Q13156 261 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 ZNF460Q14592 562 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 DBX2Q6ZNG2 339 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 TRPM8Q7Z2W7 1104 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PDZD3Q86UT5 571 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 GPSM1Q86YR5 675 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 RASGRP3Q8IV61 690 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 DEFB119Q8N690 84 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PDPRQ8NCN5 879 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 FBXO15Q8NCQ5 510 aaPredicted RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PHC3Q8NDX5 983 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 GIMAP7Q8NHV1 300 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PTERQ96BW5 349 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 LINGO1Q96FE5 620 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 TOE1Q96GM8 510 aaKnown RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 ACOX2Q99424 681 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 C1QTNF2Q9BXJ5 285 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 C12orf65Q9H3J6 166 aaKnown RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 ALG9Q9H6U8 611 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 GAREM1Q9H706 876 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 RMI1Q9H9A7 625 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 TRIM39Q9HCM9 518 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 TM7SF3Q9NS93 570 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 ZNF358Q9NW07 568 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 DNAJC28Q9NX36 388 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 USP36Q9P275 1121 aaKnown RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 CPSF2Q9P2I0 782 aaKnown RBP8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PCOLCE2Q9UKZ9 415 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 RNF112Q9ULX5 631 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 NCKAP1Q9Y2A7 1128 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 OARD1Q9Y530 152 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 LAMA5O15230 3695 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 PLXNA2O75051 1894 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
PTPRE-207ENST00000471218 GOLGA8QA0A0J9YX86 632 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GOLGA8OA6NCC3 632 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CCT8L1PA6NM43 557 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GOLGA8NF8WBI6 632 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 MATN2O00339 956 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 BTN3A1O00481 513 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 MID1O15344 667 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 HDAC3O15379 428 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TNFSF14O43557 240 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SNX2O60749 519 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CCDC22O60826 627 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CBFA2T3O75081 653 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GPC4O75487 556 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SOD1P00441 154 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 S100BP04271 92 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms