RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 HACD1B0YJ81 288 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 E7EQ34 232 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 GAPDHSO14556 408 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 SRP72O76094 671 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 CA5AP35218 305 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 RORAP35398 523 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 GEMP55040 296 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 ITGA1P56199 1179 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 ATP1A4Q13733 1029 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 NCF4Q15080 339 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 LLGL1Q15334 1064 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 PTCHD3Q3KNS1 767 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 LCN10Q6JVE6 187 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 FAM198BQ6UWH4 519 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 SPOCD1Q6ZMY3 1216 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 TMTC1Q8IUR5 882 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 GPR135Q8IZ08 494 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 IQCKQ8N0W5 287 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 ZBTB2Q8N680 514 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 RBMXL3Q8N7X1 1067 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 OR1L3Q8NH93 324 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 HEXDCQ8WVB3 486 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 RBM41Q96IZ5 413 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 LINC00615Q96LM1 132 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 IP6K3Q96PC2 410 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 SMAD5Q99717 465 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 DHRS4Q9BTZ2 278 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 FICDQ9BVA6 458 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 VPS37BQ9H9H4 285 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 C5AR2Q9P296 337 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 GPN3Q9UHW5 284 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 HYOU1Q9Y4L1 999 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 ARL5AQ9Y689 179 aa13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 PRRC2CQ9Y520 2896 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-208ENST00000470737 PSTPIP1O43586 416 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 ANXA9O76027 345 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 IGHEP01854 428 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 ALPPP05187 535 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 MSL3P1P0C860 447 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 COMTP21964 271 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 PRDX3P30048 256 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 OTX2P32243 289 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 LMAN1P49257 510 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 PRLHRP49683 370 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 HADHBP55084 474 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 RAPSNQ13702 412 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 ELOAQ14241 798 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 PTPRCAPQ14761 206 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 VWA5B1Q5TIE3 1220 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 FAM69BQ5VUD6 431 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 LYPLAL1Q5VWZ2 237 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 ITPRIPL1Q6GPH6 555 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 MAMDC2Q7Z304 686 aaPredicted RBP13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 CCDC50Q8IVM0 306 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 Q8NA96 180 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 CLEC1AQ8NC01 280 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 OR4K2Q8NGD2 314 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 FER1L6-AS2Q96M78 137 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 FKBPLQ9UIM3 349 aa13.46□□□□□ -0.25
SEMA3F-208ENST00000470737 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 C5orf60A6NFR6 353 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 C2orf74A8MZ97 194 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 PEX12O00623 359 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 ZNF749O43361 778 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CRTAMO95727 393 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 AGTP01019 485 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CAPN1P07384 714 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CD63P08962 238 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 ST6GAL1P15907 406 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 ITGALP20701 1170 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 HADHAP40939 763 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 PRPSAP1Q14558 356 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 NR6A1Q15406 480 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 TFDP3Q5H9I0 405 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CCDC181Q5TID7 509 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 NAT14Q8WUY8 206 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 LRRC45Q96CN5 670 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CALR3Q96L12 384 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 COPS8Q99627 209 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 GBA3Q9H227 469 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 MVB12BQ9H7P6 319 aa13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 LUC7LQ9NQ29 371 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-208ENST00000470737 CCDC88CQ9P219 2028 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 C17orf113A0A1B0GUU1 675 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 H7C0C1 242 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 BTN3A1O00481 513 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 LDB2O43679 373 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 ZRANB2O95218 330 aaKnown RBP eCLIP13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 RNF224P0DH78 156 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 ATP1B2P14415 290 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 FOLR3P41439 243 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 ATP5OP48047 213 aa13.44□□□□□ -0.26
SEMA3F-208ENST00000470737 SSPNQ14714 243 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms