RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ZNF658BQ4V348 819 aaPredicted RBP16.99■□□□□ 0.31
COL7A1-208ENST00000470076 ZRANB3Q5FWF4 1079 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 KCTD11Q693B1 232 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 AADACL2Q6P093 401 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 FBXO38Q6PIJ6 1188 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 ARHGEF18Q6ZSZ5 1173 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 SERPINA9Q86WD7 417 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 LRRC57Q8N9N7 239 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 TTC13Q8NBP0 860 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 SLC38A9Q8NBW4 561 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 MIB2Q96AX9 1013 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 DNAJC1Q96KC8 554 aaKnown RBP16.99■□□□□ 0.31
COL7A1-208ENST00000470076 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 CHST8Q9H2A9 424 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 TFB2MQ9H5Q4 396 aaKnown RBP16.99■□□□□ 0.31
COL7A1-208ENST00000470076 MVB12BQ9H7P6 319 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 NLE1Q9NVX2 485 aaPredicted RBP16.99■□□□□ 0.31
COL7A1-208ENST00000470076 USP9XQ93008 2570 aaPredicted RBP16.99■□□□□ 0.31
COL7A1-208ENST00000470076 MED13Q9UHV7 2174 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 USP9YO00507 2555 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 SPENQ96T58 3664 aaKnown RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 GSAPA4D1B5 854 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 MEN1O00255 615 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 CCL22O00626 93 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 DNAJB5O75953 348 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 PTMAP06454 111 aaKnown RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 RAB40ALP0C0E4 278 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 PRDX3P30048 256 aaKnown RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 PREPP48147 710 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 CDKN1CP49918 316 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 SRSF1Q07955 248 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 IL10RAQ13651 578 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 ATCAYQ86WG3 371 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 MRFAP1L1Q96HT8 127 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 TRIM55Q9BYV6 548 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 PITPNM3Q9BZ71 974 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 LACRTQ9GZZ8 138 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 LRRC40Q9H9A6 602 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 ANKMY1Q9P2S6 941 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 PLAAQ9Y263 795 aa16.98■□□□□ 0.31
COL7A1-208ENST00000470076 REXO2Q9Y3B8 237 aaKnown RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 PCDHGA9Q9Y5G4 932 aaKnown RBP16.98■□□□□ 0.31
COL7A1-208ENST00000470076 GRID2IPA4D2P6 1211 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CLEC18AA5D8T8 446 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 BTN3A3O00478 584 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 BTN3A1O00481 513 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CD97P48960 835 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 ZNF75DP51815 510 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 VAV2P52735 878 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CACNG1Q06432 222 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 ABRQ12979 859 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 P3H1Q32P28 736 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 PLEKHS1Q5SXH7 462 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CLEC18BQ6UXF7 455 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 TAS2R42Q7RTR8 314 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 AMIGO1Q86WK6 493 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 DSELQ8IZU8 1212 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 UBL4BQ8N7F7 174 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CLEC18CQ8NCF0 446 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 OR52E1Q8NGJ3 308 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 STYXQ8WUJ0 223 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CLIP3Q96DZ5 547 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 CDKN2AIPNLQ96HQ2 116 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 NLNQ9BYT8 704 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 ACSS2Q9NR19 701 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 SERTAD3Q9UJW9 196 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 AMFRQ9UKV5 643 aa16.97■□□□□ 0.31
COL7A1-208ENST00000470076 TNRC6AQ8NDV7 1962 aaKnown RBP16.97■□□□□ 0.31
COL7A1-208ENST00000470076 ARGFXA6NJG6 315 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 C2orf74A8MZ97 194 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 MIF4GDA9UHW6 222 aaKnown RBP16.96■□□□□ 0.31
COL7A1-208ENST00000470076 TMEM150CB9EJG8 249 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PSMD3O43242 534 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 AP2A2O94973 939 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PDGFAP04085 211 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 ST6GAL1P15907 406 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 CYP2A7P20853 494 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PDHA2P29803 388 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 RORAP35398 523 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PGDP52209 483 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 MLLT10P55197 1068 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 BOP1Q14137 746 aaKnown RBP16.96■□□□□ 0.31
COL7A1-208ENST00000470076 POU6F1Q14863 301 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PRAMEF17Q5VTA0 474 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 CPZQ66K79 652 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 RAD9BQ6WBX8 426 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PEX26Q7Z412 305 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 CLDN19Q8N6F1 224 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 ENDOVQ8N8Q3 282 aaKnown RBP16.96■□□□□ 0.31
COL7A1-208ENST00000470076 FAM71DQ8N9W8 422 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 PHC3Q8NDX5 983 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 OR1L3Q8NH93 324 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 TFGQ92734 400 aaPredicted RBP16.96■□□□□ 0.31
COL7A1-208ENST00000470076 ALS2CR12Q96Q35 445 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 SLC25A23Q9BV35 468 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 ING2Q9H160 280 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 ACTR5Q9H9F9 607 aaPredicted RBP16.96■□□□□ 0.31
COL7A1-208ENST00000470076 MLXIPLQ9NP71 852 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 SNX7Q9UNH6 387 aa16.96■□□□□ 0.31
COL7A1-208ENST00000470076 SPTAN1Q13813 2472 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms