RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ANKRD20A1Q5TYW2 823 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 DENND5AQ6IQ26 1287 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 CDHR3Q6ZTQ4 885 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 SYTL1Q8IYJ3 562 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 CLDN19Q8N6F1 224 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 OR52E1Q8NGJ3 308 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 SSC4DQ8WTU2 575 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 SEC14L1Q92503 715 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 RBM41Q96IZ5 413 aaKnown RBP11.9□□□□□ -0.5
HDAC3-204ENST00000469207 LRFN5Q96NI6 719 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 TRAPPC9Q96Q05 1148 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 GBA3Q9H227 469 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 OR52A5Q9H2C5 316 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 LATS2Q9NRM7 1088 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 C1GALT1Q9NS00 363 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 CCDC88CQ9P219 2028 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 TRHDEQ9UKU6 1024 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 ESPL1Q14674 2120 aa11.9□□□□□ -0.5
HDAC3-204ENST00000469207 AGAP14A8MT82 685 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 TPM3P06753 285 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 CBSLP0DN79 551 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 TPH1P17752 444 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 CYP2A7P20853 494 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 OTX2P32243 289 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 CBSP35520 551 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 MAGEA1P43355 309 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 PRLHRP49683 370 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 VAV2P52735 878 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 GEMP55040 296 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 OTUD4Q01804 1114 aaKnown RBP11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ZIC1Q15915 447 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 DEFB110Q30KQ9 67 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF658BQ4V348 819 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-204ENST00000469207 C1orf189Q5VU69 101 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF385CQ66K41 422 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-204ENST00000469207 SLC6A19Q695T7 634 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 AADACL2Q6P093 401 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 NAPRTQ6XQN6 538 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 TRIM73Q86UV7 250 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 KATNAL2Q8IYT4 538 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ADGRF3Q8IZF5 1079 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 NXPE1Q8N323 547 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ACVR1CQ8NER5 493 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 OR8K5Q8NH50 307 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 CCDC110Q8TBZ0 833 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ACTL9Q8TC94 416 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 DCUN1D1Q96GG9 259 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 CCM2Q9BSQ5 444 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 SPRTNQ9H040 489 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-204ENST00000469207 COG4Q9H9E3 785 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 SLAMF7Q9NQ25 335 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 SERTAD3Q9UJW9 196 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF451Q9Y4E5 1061 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 SPTAN1Q13813 2472 aaKnown RBP11.89□□□□□ -0.51
HDAC3-204ENST00000469207 SEC16AO15027 2179 aa11.89□□□□□ -0.51
HDAC3-204ENST00000469207 PIKFYVEQ9Y2I7 2098 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 C5orf60A6NFR6 353 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 HACD1B0YJ81 288 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 CBFA2T2O43439 604 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 LDB2O43679 373 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 DPM1O60762 260 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 KLF7O75840 302 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 ANXA9O76027 345 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 TPBGLP0DKB5 382 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 NDUFS1P28331 727 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 MC4RP32245 332 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 TRIM14Q14142 442 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 SLC9A5Q14940 896 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 BRD3Q15059 726 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 KYNUQ16719 465 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 BBS12Q6ZW61 710 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 SNX20Q7Z614 316 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 SERPINA9Q86WD7 417 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 AMIGO1Q86WK6 493 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 FAM20CQ8IXL6 584 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 CISD2Q8N5K1 135 aaKnown RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 LMNTD1Q8N9Z9 388 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 HM13Q8TCT9 377 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 TCTN2Q96GX1 697 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 DNAJC1Q96KC8 554 aaKnown RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 COPS8Q99627 209 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 HGH1Q9BTY7 390 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 SLC7A5P2Q9GIP4 190 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 FANCEQ9HB96 536 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 ZBTB20Q9HC78 741 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 ASF1BQ9NVP2 202 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 PIH1D1Q9NWS0 290 aaKnown RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 GPR83Q9NYM4 423 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 ACTR10Q9NZ32 417 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 INTUQ9ULD6 942 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 PRSS21Q9Y6M0 314 aa11.88□□□□□ -0.51
HDAC3-204ENST00000469207 PRRC2CQ9Y520 2896 aaKnown RBP11.88□□□□□ -0.51
HDAC3-204ENST00000469207 RP1L1Q8IWN7 2480 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 C17orf113A0A1B0GUU1 675 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 MACROD2A1Z1Q3 448 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms