RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
RPL39-202ENST00000468844 RNF112Q9ULX5 631 aa17.12■□□□□ 0.33
RPL39-202ENST00000468844 VILLO15195 856 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 RASGRP1O95267 797 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 VCLP18206 1134 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 AK4P27144 223 aaPredicted RBP17.11■□□□□ 0.33
RPL39-202ENST00000468844 MDH1P40925 334 aaKnown RBP17.11■□□□□ 0.33
RPL39-202ENST00000468844 NXPH1P58417 271 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 LRP8Q14114 963 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 TGFBIQ15582 683 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 PHKG1Q16816 387 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 CEP68Q76N32 757 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 EXT2Q93063 718 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 UTP6Q9NYH9 597 aaKnown RBP17.11■□□□□ 0.33
RPL39-202ENST00000468844 PILRBQ9UKJ0 227 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 PSMD13Q9UNM6 376 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 PCDHGA2Q9Y5H1 932 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 PCDH15Q96QU1 1955 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 GFYI3L273 518 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 UBXN8O00124 270 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 KCNJ13O60928 360 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 TNFP01375 233 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 BPGMP07738 259 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 CPA3P15088 417 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 ABRQ12979 859 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 TAX1BP1Q86VP1 789 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 RASGRP3Q8IV61 690 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 C10orf107Q8IVU9 208 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 RDH11Q8TC12 318 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 DYDC1Q8WWB3 177 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 ACSL5Q9ULC5 683 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 WDR37Q9Y2I8 494 aa17.11■□□□□ 0.33
RPL39-202ENST00000468844 CCDC189A1A4V9 331 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 GALR2O43603 387 aaPredicted RBP17.1■□□□□ 0.33
RPL39-202ENST00000468844 DLX3O60479 287 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 PSIP1O75475 530 aaKnown RBP17.1■□□□□ 0.33
RPL39-202ENST00000468844 MYL2P10916 166 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 ACADLP28330 430 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 ALDH3A1P30838 453 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 IL9RQ01113 521 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 ZYG11AQ6WRX3 759 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 UBE2R2Q712K3 238 aaPredicted RBP17.1■□□□□ 0.33
RPL39-202ENST00000468844 PDZD3Q86UT5 571 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 NRROSQ86YC3 692 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 PHACTR4Q8IZ21 702 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 CFAP61Q8NHU2 1237 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 DNAJC28Q9NX36 388 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 OARD1Q9Y530 152 aa17.1■□□□□ 0.33
RPL39-202ENST00000468844 A0A1B0GTW7 788 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 NCF1BA6NI72 391 aaPredicted RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 A8MT66 165 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 NCF1CA8MVU1 366 aaPredicted RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 CSF2P04141 144 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 C8GP07360 202 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 NCF1P14598 390 aaPredicted RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 NME1P15531 152 aaKnown RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 BLKP51451 505 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 CLCNKAP51800 687 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 SP140Q13342 867 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 SIM2Q14190 667 aaPredicted RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 FRA10AC1Q70Z53 315 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 SLC12A9Q9BXP2 914 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 ZDHHC5Q9C0B5 715 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 SIRPGQ9P1W8 387 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 APOBEC3BQ9UH17 382 aaKnown RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 MID2Q9UJV3 735 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 PDE10AQ9Y233 779 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 SYCE1LA8MT33 242 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 BIRC5O15392 142 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 CELA2BP08218 269 aaPredicted RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 JUNDP17535 347 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 IDSP22304 550 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 ACTR1BP42025 376 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 ACTR1AP61163 376 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 PDK4Q16654 411 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 PEAR1Q5VY43 1037 aaPredicted RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 GPSM1Q86YR5 675 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 NUDCD3Q8IVD9 361 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 GPBAR1Q8TDU6 330 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 CKAP2Q8WWK9 683 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 LRRC61Q9BV99 259 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 WWP1Q9H0M0 922 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 PARVBQ9HBI1 364 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 PRDM8Q9NQV8 689 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 TBC1D29Q9UFV1 150 aa17.09■□□□□ 0.33
RPL39-202ENST00000468844 CFAP20Q9Y6A4 193 aaKnown RBP17.09■□□□□ 0.33
RPL39-202ENST00000468844 ASXL3Q9C0F0 2248 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 A0A1B0GVT2 93 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 ARHGEF33A8MVX0 844 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 SUPT3HB4E1H0 165 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 FFAR2O15552 330 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 SUPT3HO75486 399 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 EML2O95834 649 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 SLC35G4P0C7Q5 338 aa17.08■□□□□ 0.33
RPL39-202ENST00000468844 GNSP15586 552 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms