RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 HIC2Q96JB3 615 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 CATSPER2Q96P56 530 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 NOL11Q9H8H0 719 aaKnown RBP9.98□□□□□ -0.81
MSH5-213ENST00000468136 IPPKQ9H8X2 491 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 RMI1Q9H9A7 625 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 PREBQ9HCU5 417 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 SDR39U1Q9NRG7 319 aaPredicted RBP9.98□□□□□ -0.81
MSH5-213ENST00000468136 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 GPRC5BQ9NZH0 403 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 ZIM2Q9NZV7 527 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 BAIAP2L1Q9UHR4 511 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 SNX6Q9UNH7 406 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 PDE10AQ9Y233 779 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 MTCH2Q9Y6C9 303 aa9.98□□□□□ -0.81
MSH5-213ENST00000468136 ZNF839A8K0R7 811 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 TMEM233B4DJY2 109 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 TAPBPO15533 448 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 SPINT1O43278 529 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 CLDN9O95484 217 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 DNTTP04053 509 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 GM2AP17900 193 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 CTHP32929 405 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 SLC6A12P48065 614 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 HSPA7P48741 367 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 AGTR2P50052 363 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 RPS21P63220 83 aaKnown RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 SEMG2Q02383 582 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 EMX2Q04743 252 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 FOXM1Q08050 763 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 CNTN1Q12860 1018 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 CUL3Q13618 768 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 BOP1Q14137 746 aaKnown RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 MMEL1Q495T6 779 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 LRRC73Q5JTD7 316 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 LIPJQ5W064 366 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 CLEC6AQ6EIG7 209 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 PGM2L1Q6PCE3 622 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 UNC5DQ6UXZ4 953 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 USP30Q70CQ3 517 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 SNX32Q86XE0 403 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 ULK2Q8IYT8 1036 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 ZNF366Q8N895 744 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 RASGEF1AQ8N9B8 481 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 L3MBTL4Q8NA19 623 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 GLB1L3Q8NCI6 653 aaPredicted RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 SKA2Q8WVK7 121 aaPredicted RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 COX14Q96I36 57 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 FAM161BQ96MY7 647 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 NSUN5Q96P11 429 aaKnown RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 HOPXQ9BPY8 73 aaPredicted RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 THTPAQ9BU02 230 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 WRAP53Q9BUR4 548 aaKnown RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 BRINP2Q9C0B6 783 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 MTG2Q9H4K7 406 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 RNPEPL1Q9HAU8 725 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 ITM2CQ9NQX7 267 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 DNAJC11Q9NVH1 559 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 GID8Q9NWU2 228 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 ASIC5Q9NY37 505 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 CNOT6Q9ULM6 557 aaKnown RBP9.97□□□□□ -0.81
MSH5-213ENST00000468136 FZD4Q9ULV1 537 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 MAPRE3Q9UPY8 281 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 NCKAP1Q9Y2A7 1128 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 TMED5Q9Y3A6 229 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 FIS1Q9Y3D6 152 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 ST14Q9Y5Y6 855 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 DENND4AQ7Z401 1863 aa9.97□□□□□ -0.81
MSH5-213ENST00000468136 PLXNB3Q9ULL4 1909 aa9.96□□□□□ -0.81
MSH5-213ENST00000468136 PIKFYVEQ9Y2I7 2098 aa9.96□□□□□ -0.81
MSH5-213ENST00000468136 LOC100653049A0A140TA62 436 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 MGAT4DA6NG13 374 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 H3BM21 787 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 K7EQS6 105 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 OR7A17O14581 309 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 TOR1BO14657 336 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 NRP2O60462 931 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 MMP20O60882 483 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 ULK1O75385 1050 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 KRT34O76011 436 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 OR4F21O95013 312 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 GUCA1CO95843 209 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 SOD1P00441 154 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 JUNP05412 331 aaKnown RBP9.96□□□□□ -0.82
MSH5-213ENST00000468136 HOXC4P09017 264 aaPredicted RBP9.96□□□□□ -0.82
MSH5-213ENST00000468136 HSD3B1P14060 373 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 ITGAXP20702 1163 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 PRPH2P23942 346 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 HSD3B2P26439 372 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 MAPK1P28482 360 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 LTBRP36941 435 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 ARL1P40616 181 aaPredicted RBP9.96□□□□□ -0.82
MSH5-213ENST00000468136 CPA2P48052 419 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 MTTPP55157 894 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 ERVPABLB-1P60509 514 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 ACTR3P61158 418 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 MESP2Q0VG99 397 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 TRAF3Q13114 568 aa9.96□□□□□ -0.82
MSH5-213ENST00000468136 SMAD4Q13485 552 aaKnown RBP9.96□□□□□ -0.82
MSH5-213ENST00000468136 PHKG1Q16816 387 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms