RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 NAXDQ8IW45 347 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 TRIM48Q8IWZ4 208 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 MYO1HQ8N1T3 1032 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 GPR156Q8NFN8 814 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 SPDYE1Q8NFV5 336 aaPredicted RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 SLC37A2Q8TED4 501 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 SETD7Q8WTS6 366 aaKnown RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 TFGQ92734 400 aaPredicted RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 CXorf40BQ96DE9 158 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 LINGO1Q96FE5 620 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 PDLIM5Q96HC4 596 aaKnown RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 ZIM3Q96PE6 472 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 RUFY1Q96T51 708 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 POT1Q9NUX5 634 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 IMP3Q9NV31 184 aaKnown RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 EURLQ9NYK6 297 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 COLEC10Q9Y6Z7 277 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 A0A096LPK6 155 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 OR52A4PA6NMU1 304 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 MPOP05164 745 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 C2P06681 752 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 SLC35E2BP0CK96 405 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 XRCC1P18887 633 aaPredicted RBP14.85□□□□□ -0.03
SNIP1-202ENST00000468040 KRT15P19012 456 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 NDUFS1P28331 727 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 MAGEA12P43365 314 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 FASLGP48023 281 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 BIRC2Q13490 618 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 KRT33BQ14525 404 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 NR0B2Q15466 257 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 KRT71Q3SY84 523 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 TMEM207Q6UWW9 146 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 TBC1D1Q86TI0 1168 aaPredicted RBP14.85□□□□□ -0.03
SNIP1-202ENST00000468040 SLC35F3Q8IY50 421 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 KYQ8NBH2 561 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 OR6C4Q8NGE1 309 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 NETO1Q8TDF5 533 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 RHBDD1Q8TEB9 315 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 EEF1AKMT1Q8WVE0 214 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 ANKRD7Q92527 254 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 CABS1Q96KC9 395 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 APOLD1Q96LR9 279 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 INSM2Q96T92 566 aaPredicted RBP14.85□□□□□ -0.03
SNIP1-202ENST00000468040 MVB12BQ9H7P6 319 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 SCHIP1Q9P0W5 487 aaPredicted RBP14.85□□□□□ -0.03
SNIP1-202ENST00000468040 ZNF624Q9P2J8 865 aaPredicted RBP14.85□□□□□ -0.03
SNIP1-202ENST00000468040 CPNE7Q9UBL6 633 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 LGALS13Q9UHV8 139 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 ASF1AQ9Y294 204 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 BTBD3Q9Y2F9 522 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 ACOT9Q9Y305 439 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 CABIN1Q9Y6J0 2220 aa14.85□□□□□ -0.03
SNIP1-202ENST00000468040 MATN4O95460 622 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 TSPAN12O95859 305 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 VIPP01282 170 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 MT-ND3P03897 115 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 C8GP07360 202 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 CCNFP41002 786 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 CSRP3P50461 194 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 DUSP3P51452 185 aaPredicted RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 PGGT1BP53609 377 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 MAZP56270 477 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 UBE2IP63279 158 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 HHEXQ03014 270 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 ABRQ12979 859 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 PROX2Q3B8N5 592 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 CEP85LQ5SZL2 805 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 TTC23LQ6PF05 361 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 PIWIL4Q7Z3Z4 852 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 RBM12BQ8IXT5 1001 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 KIAA2013Q8IYS2 634 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 TBC1D21Q8IYX1 336 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 ARL14Q8N4G2 192 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 MAGEC3Q8TD91 643 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 ACMSDQ8TDX5 336 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 MZB1Q8WU39 189 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 ZFPM2Q8WW38 1151 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 PATE1Q8WXA2 126 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 SH3KBP1Q96B97 665 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 UBXN10Q96LJ8 280 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 CDC6Q99741 560 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 DERL2Q9GZP9 239 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 TRIT1Q9H3H1 467 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 FTSJ1Q9UET6 329 aa14.84□□□□□ -0.03
SNIP1-202ENST00000468040 TSR3Q9UJK0 312 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 CFAP20Q9Y6A4 193 aaKnown RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 COL5A1P20908 1838 aaPredicted RBP14.84□□□□□ -0.03
SNIP1-202ENST00000468040 DMDP11532 3685 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 LAMA1P25391 3075 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 TRBV23OR9-2A0A075B6M9 112 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 NUDT21O43809 227 aaKnown RBP14.83□□□□□ -0.04
SNIP1-202ENST00000468040 SH3BP5O60239 455 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 KDM1AO60341 852 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 RFPL1O75677 317 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 LDOC1O95751 146 aaPredicted RBP14.83□□□□□ -0.04
SNIP1-202ENST00000468040 CATP04040 527 aaKnown RBP14.83□□□□□ -0.04
SNIP1-202ENST00000468040 CCDC166P0CW27 439 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 COL6A2P12110 1019 aa14.83□□□□□ -0.04
SNIP1-202ENST00000468040 GLB1P16278 677 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms