RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CASS4Q9NQ75 786 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 FGF21Q9NSA1 209 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 STARD5Q9NSY2 213 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 GEMIN8Q9NWZ8 242 aaKnown RBP18.57■□□□□ 0.56
COL7A1-207ENST00000467985 TRMT1Q9NXH9 659 aaKnown RBP18.57■□□□□ 0.56
COL7A1-207ENST00000467985 IL17BQ9UHF5 180 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 KCND3Q9UK17 655 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 PADI1Q9ULC6 663 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 DRG1Q9Y295 367 aaKnown RBP18.57■□□□□ 0.56
COL7A1-207ENST00000467985 PIKFYVEQ9Y2I7 2098 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 BSNQ9UPA5 3926 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 CCDC78A2IDD5 438 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 AP3B1O00203 1094 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 NKX2-8O15522 239 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 OR56A5P0C7T3 313 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 EBLN1P0CF75 366 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 FOXN2P32314 431 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 PPARGP37231 505 aaPredicted RBP18.56■□□□□ 0.56
COL7A1-207ENST00000467985 CDC20Q12834 499 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 TSTD2Q5T7W7 516 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 HDAC10Q969S8 669 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 FAM117AQ9C073 453 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 EIF2B3Q9NR50 452 aaKnown RBP18.56■□□□□ 0.56
COL7A1-207ENST00000467985 C1GALT1Q9NS00 363 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 HOMER3Q9NSC5 361 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 TUBD1Q9UJT1 453 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 POMT2Q9UKY4 750 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 PCDHB3Q9Y5E6 796 aa18.56■□□□□ 0.56
COL7A1-207ENST00000467985 HEMK1Q9Y5R4 338 aaPredicted RBP18.56■□□□□ 0.56
COL7A1-207ENST00000467985 SETXQ7Z333 2677 aaKnown RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 MAP3K7O43318 606 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 PRKAR1AP10644 381 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 POLR2CP19387 275 aaPredicted RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 TCN2P20062 427 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 PDHA2P29803 388 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 DLSTP36957 453 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 PREPP48147 710 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 KPNA2P52292 529 aaKnown RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 ACVR1Q04771 509 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 NFATC3Q12968 1075 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 BOP1Q14137 746 aaKnown RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 KCNAB1Q14722 419 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 SIX1Q15475 284 aaPredicted RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 PWWP2BQ6NUJ5 590 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 GSTA5Q7RTV2 222 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 PPHLN1Q8NEY8 458 aaKnown RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 OR4L1Q8NH43 312 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 TFGQ92734 400 aaPredicted RBP18.55■□□□□ 0.56
COL7A1-207ENST00000467985 SGSM3Q96HU1 749 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 SYTL2Q9HCH5 934 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 SOHLH2Q9NX45 425 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 CROTQ9UKG9 612 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 BTRCQ9Y297 605 aa18.55■□□□□ 0.56
COL7A1-207ENST00000467985 OR51F1A6NGY5 319 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 C21orf140B9A014 251 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 J3QKU1 62 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 RECKO95980 971 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 GOT2P00505 430 aaKnown RBP18.54■□□□□ 0.56
COL7A1-207ENST00000467985 FGGP02679 453 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 ETS1P14921 441 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 ITGB6P18564 788 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 CDH3P22223 829 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 RPL22P35268 128 aaKnown RBP18.54■□□□□ 0.56
COL7A1-207ENST00000467985 GRIA1P42261 906 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 POLE2P56282 527 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 PRAMEP78395 509 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 KCNAB2Q13303 367 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 SYTL3Q4VX76 610 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 AARS2Q5JTZ9 985 aaKnown RBP18.54■□□□□ 0.56
COL7A1-207ENST00000467985 OR52E1Q8NGJ3 308 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 OR6P1Q8NGX9 317 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 ELMO1Q92556 727 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 TSSK1BQ9BXA7 367 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 SLC25A18Q9H1K4 315 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 FANCEQ9HB96 536 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 ASH1LQ9NR48 2969 aaKnown RBP18.54■□□□□ 0.56
COL7A1-207ENST00000467985 KCND1Q9NSA2 647 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 POLG2Q9UHN1 485 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 TCAF1Q9Y4C2 921 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 PCDHGA6Q9Y5G7 932 aa18.54■□□□□ 0.56
COL7A1-207ENST00000467985 FLNBO75369 2602 aaKnown RBP18.54■□□□□ 0.56
COL7A1-207ENST00000467985 UBR5O95071 2799 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-207ENST00000467985 GSAPA4D1B5 854 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 TERTO14746 1132 aaKnown RBP18.53■□□□□ 0.56
COL7A1-207ENST00000467985 KDM1AO60341 852 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
COL7A1-207ENST00000467985 ARCN1P48444 511 aaKnown RBP18.53■□□□□ 0.56
COL7A1-207ENST00000467985 FASTKD1Q53R41 847 aaKnown RBP18.53■□□□□ 0.56
COL7A1-207ENST00000467985 PCID2Q5JVF3 399 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 AMIGO1Q86WK6 493 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 GLIS1Q8NBF1 620 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 PHC3Q8NDX5 983 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 APOBEC4Q8WW27 367 aaKnown RBP18.53■□□□□ 0.56
COL7A1-207ENST00000467985 SEC14L1Q92503 715 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 TLR10Q9BXR5 811 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 LHX9Q9NQ69 397 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 LATS2Q9NRM7 1088 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 SLC2A6Q9UGQ3 507 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 ANAPC5Q9UJX4 755 aa18.53■□□□□ 0.56
COL7A1-207ENST00000467985 PRSS21Q9Y6M0 314 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms