RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 SPRY1O43609 319 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 SLC28A2O43868 658 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 OR10H2O60403 315 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 CELF2O95319 508 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 LIPFP07098 398 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 SNRNP70P08621 437 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 CBLP22681 906 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 HSPA4P34932 840 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 CCR10P46092 362 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 RPS18P62269 152 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 RBP5P82980 135 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 POU3F1Q03052 451 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 EEF1A2Q05639 463 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 BFSP1Q12934 665 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 MFAP5Q13361 173 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 PDSS1Q5T2R2 415 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 PRR27Q6MZM9 219 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 PET117Q6UWS5 81 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 MEPCEQ7L2J0 689 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 ARMC9Q7Z3E5 817 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 GALNTL5Q7Z4T8 443 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 CPSF7Q8N684 471 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 DEPDC1BQ8WUY9 529 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 SECTM1Q8WVN6 248 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 SECISBP2LQ93073 1101 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 EVA1AQ9H8M9 152 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 LIPGQ9Y5X9 500 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 SPIN1Q9Y657 262 aaPredicted RBP4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 A0A1W2PPI3 338 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 A0A1W2PPQ1 181 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 ANXA2P2A6NMY6 339 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 CLDN4O14493 209 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 RNASEH1O60930 286 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 SLCO2B1O94956 709 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 GCNT3O95395 438 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 FGF3P11487 239 aaPredicted RBP4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 PSMA3P25788 255 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 TNFRSF8P28908 595 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 HOXC8P31273 242 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 NR2C2P49116 596 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 FUT6P51993 359 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 RPL24P83731 157 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 PPIGQ13427 754 aaKnown RBP eCLIP4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF273Q14593 569 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 KIR2DS3Q14952 304 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 ALDH1L2Q3SY69 923 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 KLHL26Q53HC5 615 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 MDH1BQ5I0G3 518 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 RAD9BQ6WBX8 426 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 CCDC107Q8WV48 283 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 SORCS1Q8WY21 1168 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 SCRN2Q96FV2 425 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 ERO1AQ96HE7 468 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 TBC1D17Q9HA65 648 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 TRPC7Q9HCX4 862 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 TCF7L2Q9NQB0 619 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 ABCF3Q9NUQ8 709 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 CPSF3Q9UKF6 684 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 ABT1Q9ULW3 272 aaKnown RBP4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 PCDHGB1Q9Y5G3 927 aa4.79□□□□□ -1.64
GAPVD1-211ENST00000467707 TEX13DA0A0J9YY54 714 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 C5orf60A6NFR6 353 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 TRIM77I1YAP6 450 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 TULP2O00295 520 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 MEIS2O14770 477 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 PSMA7O14818 248 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 SIX3O95343 332 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 IGHV4-39P01824 125 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 KRT19P08727 400 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 GLULP15104 373 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ACSM1Q08AH1 577 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 FHL1Q13642 323 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ASIC2Q16515 512 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ACCSLQ4AC99 568 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 CCNYL2Q5T2Q4 361 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF324BQ6AW86 544 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 C11orf88Q6PI97 169 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 SPSB3Q6PJ21 355 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF517Q6ZMY9 492 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ZBTB49Q6ZSB9 765 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 PIWIL4Q7Z3Z4 852 aaKnown RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 CEP57L1Q8IYX8 460 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF611Q8N823 705 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 Q8NFD4 153 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 RNF128Q8TEB7 428 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 EXT2Q93063 718 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 SPSB1Q96BD6 273 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 DHX58Q96C10 678 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 MUS81Q96NY9 551 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 FERMT1Q9BQL6 677 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 POLR3CQ9BUI4 534 aaPredicted RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ST6GALNAC4Q9H4F1 302 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 APOBEC3GQ9HC16 384 aaKnown RBP4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 ACKR4Q9NPB9 350 aa4.78□□□□□ -1.64
GAPVD1-211ENST00000467707 OLFML3Q9NRN5 406 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms