RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CD1DP15813 335 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 CREB1P16220 341 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 IDSP22304 550 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 RPL10P27635 214 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 RGS4P49798 205 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 CCT8P50990 548 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 IL9RQ01113 521 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 CLCA4Q14CN2 919 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 SF3A2Q15428 464 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 SEPT7Q16181 437 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 UAP1L1Q3KQV9 507 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 TTMPQ5BVD1 217 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 LRRC8EQ6NSJ5 796 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 LVRNQ6Q4G3 990 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 RAPH1Q70E73 1250 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 TAF8Q7Z7C8 310 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 C17orf82Q86X59 251 aaPredicted RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 SFTPA2Q8IWL1 248 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 SRRM1Q8IYB3 904 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 C4orf33Q8N1A6 199 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 MINDY1Q8N5J2 469 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 DLG3Q92796 817 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 PTERQ96BW5 349 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 PKNOX2Q96KN3 472 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 INSM2Q96T92 566 aaPredicted RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 VPS11Q9H270 941 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 DNAAF2Q9NVR5 837 aaKnown RBP10.89□□□□□ -0.67
VCP-204ENST00000466100 ZNF358Q9NW07 568 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 SENP1Q9P0U3 644 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 TLK1Q9UKI8 766 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 PSMD13Q9UNM6 376 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 ACTL7BQ9Y614 415 aa10.89□□□□□ -0.67
VCP-204ENST00000466100 GFYI3L273 518 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 ZBTB14O43829 449 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 TYROBPO43914 113 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 OPA1O60313 960 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 PCDHGA12O60330 932 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 NOBOXO60393 691 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 PSIP1O75475 530 aaKnown RBP10.88□□□□□ -0.67
VCP-204ENST00000466100 SLC35G4P0C7Q5 338 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 KRT4P19013 534 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 UBE2IP63279 158 aaKnown RBP10.88□□□□□ -0.67
VCP-204ENST00000466100 NHLH1Q02575 133 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 SPEM2Q0P670 501 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 CSHL1Q14406 222 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 PCM1Q15154 2024 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 OR4D1Q15615 310 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 RPE65Q16518 533 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 CSRP2Q16527 193 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 TECRLQ5HYJ1 363 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 DUS1LQ6P1R4 473 aaKnown RBP10.88□□□□□ -0.67
VCP-204ENST00000466100 IYDQ6PHW0 289 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 OGFOD3Q6PK18 319 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 SBSNQ6UWP8 590 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 UNC5DQ6UXZ4 953 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 CDHR3Q6ZTQ4 885 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 TBC1D1Q86TI0 1168 aaPredicted RBP10.88□□□□□ -0.67
VCP-204ENST00000466100 LCA5Q86VQ0 697 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 GKN2Q86XP6 184 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 NAGSQ8N159 534 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 SPATA6LQ8N4H0 392 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 BANPQ8N9N5 519 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 PATE1Q8WXA2 126 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 ASB11Q8WXH4 323 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 NXNL1Q96CM4 212 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 APOPT1Q96IL0 206 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 ATP6V1G3Q96LB4 118 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 CENPHQ9H3R5 247 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 SSU72Q9NP77 194 aaKnown RBP10.88□□□□□ -0.67
VCP-204ENST00000466100 RXFP3Q9NSD7 469 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 SEMA4GQ9NTN9 838 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 NCDNQ9UBB6 729 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
VCP-204ENST00000466100 ADAMTS6Q9UKP5 1117 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 EMCNQ9ULC0 261 aa10.88□□□□□ -0.67
VCP-204ENST00000466100 PIEZO1Q92508 2521 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 NPEPPSL1A6NEC2 478 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 OR52A4PA6NMU1 304 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 ARHGEF33A8MVX0 844 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 CDC7O00311 574 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
VCP-204ENST00000466100 SNX2O60749 519 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 GSTA1P08263 222 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 SBK3P0C264 359 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 MTHFD1P11586 935 aaKnown RBP10.87□□□□□ -0.67
VCP-204ENST00000466100 TFEBP19484 476 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 CRHR1P34998 444 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 SLC19A1P41440 591 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 ATP6V0D1P61421 351 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 SP140Q13342 867 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 GRB7Q14451 532 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 TSNQ15631 228 aaKnown RBP10.87□□□□□ -0.67
VCP-204ENST00000466100 FAM83EQ2M2I3 478 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 TSNAXIP1Q2TAA8 658 aa10.87□□□□□ -0.67
VCP-204ENST00000466100 DEFB133Q30KQ1 61 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms