RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 LRRC1Q9BTT6 524 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 KIFC1Q9BW19 673 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 YIPF2Q9BWQ6 316 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 RAB17Q9H0T7 212 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 VPS18Q9P253 973 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 MARCH4Q9P2E8 410 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-205ENST00000465582 SPASTQ9UBP0 616 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 ANAPC5Q9UJX4 755 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 APPL1Q9UKG1 709 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 PCOLCE2Q9UKZ9 415 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 CHMP2BQ9UQN3 213 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 KCNK6Q9Y257 313 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 UTP11Q9Y3A2 253 aaKnown RBP6.36□□□□□ -1.39
SSBP1-205ENST00000465582 PCDHGB2Q9Y5G2 931 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 MAD1L1Q9Y6D9 718 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 DGKBQ9Y6T7 804 aa6.36□□□□□ -1.39
SSBP1-205ENST00000465582 CABIN1Q9Y6J0 2220 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 COL27A1Q8IZC6 1860 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 H0YHG0 523 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 AP3B1O00203 1094 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SIGLEC6O43699 453 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SGTAO43765 313 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 NUAK1O60285 661 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ADAM11O75078 769 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 RFPL3O75679 317 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 PPM1BO75688 479 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ANXA6P08133 673 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ALPPL2P10696 532 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CTSEP14091 401 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 MSH3P20585 1137 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 PSMA3P25788 255 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ELK3P41970 407 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ACTR1BP42025 376 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 GRK6P43250 576 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 MASP1P48740 699 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 BLKP51451 505 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 NOVA1P51513 510 aaKnown RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ARL4CP56559 192 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ACTR1AP61163 376 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 GUCY2DQ02846 1103 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TMEM115Q12893 351 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ILF3Q12906 894 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CALCOCO2Q13137 446 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 DNAJC3Q13217 504 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SLC14A1Q13336 389 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 LAMB3Q13751 1172 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TUBB2AQ13885 445 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CRYMQ14894 314 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ELOCQ15369 112 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 INSCQ1MX18 579 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SKIDA1Q1XH10 827 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TUBB8Q3ZCM7 444 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 DNAJC21Q5F1R6 531 aaKnown RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 KIAA0930Q6ICG6 404 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 POMZP3Q6PJE2 187 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 C1orf229Q6ZS94 237 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CHST15Q7LFX5 561 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 NLRP9Q7RTR0 991 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 DGLUCYQ7Z3D6 616 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TAF8Q7Z7C8 310 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 C11orf96Q7Z7L8 435 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 PIP4P1Q86T03 277 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ZNF547Q8IVP9 402 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 IGDCC3Q8IVU1 814 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SCUBE1Q8IWY4 988 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SLC35F3Q8IY50 421 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 FSTL5Q8N475 847 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 MMGT1Q8N4V1 131 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 BEND7Q8N7W2 519 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 RASGEF1AQ8N9B8 481 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 OR4C6Q8NH72 309 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 FBXO25Q8TCJ0 367 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 LKAAEAR1Q8TD35 194 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 DTX3LQ8TDB6 740 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 PATE1Q8WXA2 126 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.35□□□□□ -1.393e-10■■■■■ 47.7
SSBP1-205ENST00000465582 STAMBPL1Q96FJ0 436 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CFAP36Q96G28 342 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SCARF2Q96GP6 870 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CNDP2Q96KP4 475 aaKnown RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 FCRL3Q96P31 734 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-205ENST00000465582 COPS8Q99627 209 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 C19orf43Q9BQ61 176 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TUBB2BQ9BVA1 445 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 OSGEPL1Q9H4B0 414 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 PLAC1Q9HBJ0 212 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TRIM39Q9HCM9 518 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 CATSPERZQ9NTU4 200 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 NLGN3Q9NZ94 848 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 TAAR2Q9P1P5 351 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 WHRNQ9P202 907 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 SLC17A6Q9P2U8 582 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 FTSJ1Q9UET6 329 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 ZNHIT2Q9UHR6 403 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 DNAJC16Q9Y2G8 782 aa6.35□□□□□ -1.39
SSBP1-205ENST00000465582 PRSS21Q9Y6M0 314 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms