RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SETD4Q9NVD3 440 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 LOC101059948A0A1B0GTJ6 334 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 MSGN1A6NI15 193 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 CLDN1O95832 211 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 CLEC3BP05452 202 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 CCR9P51686 369 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 RPS3AP61247 264 aaKnown RBP4.24□□□□□ -1.73
SMC4-205ENST00000465563 PPP2R2BQ00005 443 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 ELAVL2Q12926 359 aaKnown RBP4.24□□□□□ -1.73
SMC4-205ENST00000465563 PEX6Q13608 980 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 TBCEQ15813 527 aaPredicted RBP4.24□□□□□ -1.73
SMC4-205ENST00000465563 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 RSRC2Q7L4I2 434 aaKnown RBP4.24□□□□□ -1.73
SMC4-205ENST00000465563 MYRIPQ8NFW9 859 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 OR5AP2Q8NGF4 316 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 KCNG4Q8TDN1 519 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 ZFAND2BQ8WV99 257 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 ELMOD3Q96FG2 381 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 DACH2Q96NX9 599 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 NCAPGQ9BPX3 1015 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 HHATLQ9HCP6 504 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 UBN1Q9NPG3 1134 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 NPAP1Q9NZP6 1156 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 WDR37Q9Y2I8 494 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 RIPK3Q9Y572 518 aa4.24□□□□□ -1.73
SMC4-205ENST00000465563 E9PI62 339 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 GPIP06744 558 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 ZSCAN5DPP0CG00 497 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 HUNKP57058 714 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 MED22Q15528 200 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 NCEH1Q6PIU2 408 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 FIP1L1Q6UN15 594 aaKnown RBP4.23□□□□□ -1.73
SMC4-205ENST00000465563 LINGO4Q6UY18 593 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 GPRIN3Q6ZVF9 776 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 LACC1Q8IV20 430 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 Q8N377 158 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 GTF3AQ92664 365 aaKnown RBP4.23□□□□□ -1.73
SMC4-205ENST00000465563 OR2A14Q96R47 310 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 USP28Q96RU2 1077 aa4.23□□□□□ -1.73
SMC4-205ENST00000465563 SOS1Q07889 1333 aaPredicted RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 MEX3AA1L020 520 aaKnown RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 CREB3O43889 395 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 HSPA1AP0DMV8 641 aaKnown RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 HSPA1BP0DMV9 641 aaKnown RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 CDH2P19022 906 aaPredicted RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 CA4P22748 312 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 CA6P23280 308 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 SNRPEP62304 92 aaKnown RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 E2F5Q15329 346 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 HOGA1Q86XE5 327 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 TBC1D16Q8TBP0 767 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 MTERF3Q96E29 417 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 FAM81BQ96LP2 452 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 WWTR1Q9GZV5 400 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 ATP13A3Q9H7F0 1226 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 FBXL17Q9UF56 701 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 NENFQ9UMX5 172 aa4.22□□□□□ -1.73
SMC4-205ENST00000465563 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.22□□□□□ -1.73
SMC4-205ENST00000465563 PRSS51A0A1B0GVH4 220 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 CAPN2P17655 700 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 NMBRP28336 390 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 PGFP49763 221 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 COX10Q12887 443 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 ZRSR2Q15696 482 aaKnown RBP4.21□□□□□ -1.74
SMC4-205ENST00000465563 CFAP77Q6ZQR2 320 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 CPLX4Q7Z7G2 160 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 ARID3BQ8IVW6 561 aaPredicted RBP4.21□□□□□ -1.74
SMC4-205ENST00000465563 SMAP1Q8IYB5 467 aaPredicted RBP4.21□□□□□ -1.74
SMC4-205ENST00000465563 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 NIPA2Q8N8Q9 360 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 PPFIBP2Q8ND30 876 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 PRSS33Q8NF86 280 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 RAB11FIP5Q9BXF6 653 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 DGCR6LQ9BY27 220 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 TRIM6Q9C030 488 aaPredicted RBP4.21□□□□□ -1.74
SMC4-205ENST00000465563 DNAJC18Q9H819 358 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 A4GALTQ9NPC4 353 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 NUDT4Q9NZJ9 180 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 EPHA6Q9UF33 1036 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 MAN1B1Q9UKM7 699 aa4.21□□□□□ -1.74
SMC4-205ENST00000465563 TDRD15B5MCY1 1934 aaKnown RBP4.21□□□□□ -1.74
SMC4-205ENST00000465563 SOCS3O14543 225 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 HS6ST1O60243 411 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 ACADMP11310 421 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 SLC25A30Q5SVS4 291 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 INTS11Q5TA45 600 aaKnown RBP4.2□□□□□ -1.74
SMC4-205ENST00000465563 GKAP1Q5VSY0 366 aaPredicted RBP4.2□□□□□ -1.74
SMC4-205ENST00000465563 JADE1Q6IE81 842 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 SARM1Q6SZW1 724 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 PTAR1Q7Z6K3 402 aaPredicted RBP4.2□□□□□ -1.74
SMC4-205ENST00000465563 ARHGAP45Q92619 1136 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 RASL10AQ92737 203 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 SLCO2A1Q92959 643 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 PLK3Q9H4B4 646 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 PANK3Q9H999 370 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 SDR39U1Q9NRG7 319 aaPredicted RBP4.2□□□□□ -1.74
SMC4-205ENST00000465563 OSGIN1Q9UJX0 560 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 CMAHPQ9Y471 501 aa4.2□□□□□ -1.74
SMC4-205ENST00000465563 ZNF318Q5VUA4 2279 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms