RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CORO7P57737 925 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 TAS2R39P59534 338 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 MYLK3Q32MK0 819 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 HECTD2Q5U5R9 776 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 LYPLAL1Q5VWZ2 237 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 ZDHHC20Q5W0Z9 365 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 CNSTQ6PJW8 725 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 USP45Q70EL2 814 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 WDR75Q8IWA0 830 aaKnown RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 KIRREL3Q8IZU9 778 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 ZNF548Q8NEK5 533 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 OR13C4Q8NGS5 318 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 FRS2Q8WU20 508 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 C10orf82Q8WW14 230 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 PIH1D2Q8WWB5 315 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 CCDC97Q96F63 343 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 LYSMD1Q96S90 227 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 ARHGAP9Q9BRR9 750 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 MECRQ9BV79 373 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 GPR63Q9BZJ6 419 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 TM6SF2Q9BZW4 377 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 NPHS2Q9NP85 383 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 DNAJC28Q9NX36 388 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 KCNK4Q9NYG8 393 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 KCTD3Q9Y597 815 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 A0A1W2PQU0 124 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 K7ERQ8 282 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 SCAMP1O15126 338 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 PHGDHO43175 533 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 SMAD6O43541 496 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 TRIM13O60858 407 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 RNGTTO60942 597 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 NDUFS3O75489 264 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 ATP5HO75947 161 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 PRKCGP05129 697 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 PIRTP0C851 137 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 HGFP14210 728 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 SAT1P21673 171 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 FDXRP22570 491 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 ABL2P42684 1182 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 ADARP55265 1226 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 POLR2LP62875 67 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 IRF9Q00978 393 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 CACNG1Q06432 222 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 CLCA4Q14CN2 919 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 DLG2Q15700 870 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 LIPMQ5VYY2 423 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 LRRC8EQ6NSJ5 796 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 C16orf46Q6P387 395 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 USP53Q70EK8 1073 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 B3GNT8Q7Z7M8 397 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 VASH2Q86V25 355 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 CENPLQ8N0S6 344 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 RYBPQ8N488 228 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 ECHDC3Q96DC8 303 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 SGF29Q96ES7 293 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 SCYL1Q96KG9 808 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 NSMCE3Q96MG7 304 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 LRRC37BQ96QE4 947 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 WWP1Q9H0M0 922 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 SYTL2Q9HCH5 934 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 OXSMQ9NWU1 459 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 IL17CQ9P0M4 197 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 MARCH4Q9P2E8 410 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 KLF15Q9UIH9 416 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 APPL1Q9UKG1 709 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 PPIL1Q9Y3C6 166 aa13.6□□□□□ -0.23
HDAC6-215ENST00000465457 ANKRD17O75179 2603 aaKnown RBP13.6□□□□□ -0.23
HDAC6-215ENST00000465457 CLEC18AA5D8T8 446 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 F8W8V4 182 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 G3V2L1 256 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ZNF821O75541 412 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 PYGLP06737 847 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ALPPL2P10696 532 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SLC5A2P31639 672 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SLC1A6P48664 564 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 DUSP3P51452 185 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ARFIP2P53365 341 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ABCE1P61221 599 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ACAP2Q15057 778 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 IGFBP7Q16270 282 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 ZNF284Q2VY69 593 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 DEFB133Q30KQ1 61 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 PIP5KL1Q5T9C9 394 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 BRAT1Q6PJG6 821 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 CLEC18BQ6UXF7 455 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 PTRH1Q86Y79 214 aaKnown RBP13.59□□□□□ -0.23
HDAC6-215ENST00000465457 CAMK1DQ8IU85 385 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 SLC22A9Q8IVM8 553 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 C10orf107Q8IVU9 208 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 CEP97Q8IW35 865 aa13.59□□□□□ -0.23
HDAC6-215ENST00000465457 PLD6Q8N2A8 252 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms