RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 GPR18Q14330 331 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 KLHL35Q6PF15 583 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 RBM44Q6ZP01 1051 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 TRMT10CQ7L0Y3 403 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 PIM3Q86V86 326 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 ZC3HC1Q86WB0 502 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 Q8N9G6 341 aaPredicted RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 ACVR1CQ8NER5 493 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 FBF1Q8TES7 1133 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 UBXN4Q92575 508 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 AHCYL2Q96HN2 611 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 FOPNLQ96NB1 174 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 FERD3LQ96RJ6 166 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 CYTH2Q99418 400 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 MCMBPQ9BTE3 642 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 TRIT1Q9H3H1 467 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
USP39-211ENST00000465282 RHOJQ9H4E5 214 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 NINJ2Q9NZG7 142 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 CLCA2Q9UQC9 943 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 ASF1AQ9Y294 204 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 MED16Q9Y2X0 877 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 VWA7Q9Y334 891 aa16.53■□□□□ 0.24
USP39-211ENST00000465282 COL27A1Q8IZC6 1860 aaPredicted RBP16.52■□□□□ 0.24
USP39-211ENST00000465282 A0A1W2PQM1 296 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 FAM221BA6H8Z2 402 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 MCM3P25205 808 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 GP5P40197 560 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 KBTBD12Q3ZCT8 623 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 GRTP1Q5TC63 336 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 HES3Q5TGS1 186 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 WDR74Q6RFH5 385 aaPredicted RBP16.52■□□□□ 0.24
USP39-211ENST00000465282 NAPRTQ6XQN6 538 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 CHCHD4Q8N4Q1 142 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 DCBLD1Q8N8Z6 715 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 OR5K2Q8NHB8 316 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 DEPDC7Q96QD5 511 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 GPR21Q99679 349 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 SMYD2Q9NRG4 433 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 SLC24A2Q9UI40 661 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 TRMT6Q9UJA5 497 aaKnown RBP16.52■□□□□ 0.24
USP39-211ENST00000465282 PSAT1Q9Y617 370 aa16.52■□□□□ 0.24
USP39-211ENST00000465282 CFAP20Q9Y6A4 193 aaKnown RBP16.52■□□□□ 0.24
USP39-211ENST00000465282 CXorf49A8MYA2 514 aaPredicted RBP16.51■□□□□ 0.23
USP39-211ENST00000465282 D6RAR5 112 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 UBXN7O94888 489 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 MATN4O95460 622 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 MT-CO3P00414 261 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 TUBBP07437 444 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 JUPP14923 745 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 CCNFP41002 786 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 RGS4P49798 205 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 HECTD2Q5U5R9 776 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 TTC23LQ6PF05 361 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 PLXDC1Q8IUK5 500 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 VRK3Q8IV63 474 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 CTAGE3PQ8IX95 158 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 CNPY4Q8N129 248 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 CD200R1Q8TD46 325 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 MAGEC3Q8TD91 643 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 VPS39Q96JC1 886 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 TMEM74Q96NL1 305 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 NDNQ99608 321 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 RAB33BQ9H082 229 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 TFB2MQ9H5Q4 396 aaKnown RBP16.51■□□□□ 0.23
USP39-211ENST00000465282 ACSS3Q9H6R3 686 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 ANKZF1Q9H8Y5 726 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 SLC17A6Q9P2U8 582 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 WASF3Q9UPY6 502 aa16.51■□□□□ 0.23
USP39-211ENST00000465282 PROS1P07225 676 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 ABHD2P08910 425 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 MPC1LP0DKB6 136 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 AMD1P17707 334 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 FDXRP22570 491 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 SPRP35270 261 aaPredicted RBP16.5■□□□□ 0.23
USP39-211ENST00000465282 PMS2P54278 862 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 SHC2P98077 582 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 FOXK2Q01167 660 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 POU4F1Q01851 419 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 FOXC1Q12948 553 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 PLCL1Q15111 1095 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 AMZ1Q400G9 498 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 MAP9Q49MG5 647 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 ACSBG2Q5FVE4 666 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
USP39-211ENST00000465282 WDR93Q6P2C0 686 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 TMEM71Q6P5X7 295 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
USP39-211ENST00000465282 ZNF761Q86XN6 746 aaPredicted RBP16.5■□□□□ 0.23
USP39-211ENST00000465282 PPM1NQ8N819 430 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 GPATCH11Q8N954 259 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 SIDT2Q8NBJ9 832 aaKnown RBP16.5■□□□□ 0.23
USP39-211ENST00000465282 OR4D9Q8NGE8 314 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 RBBP8Q99708 897 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 TBC1D10AQ9BXI6 508 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 SYNDIG1Q9H7V2 258 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 POPDC3Q9HBV1 291 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 GALPQ9UBC7 116 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 EPHA6Q9UF33 1036 aa16.5■□□□□ 0.23
USP39-211ENST00000465282 NEUROG3Q9Y4Z2 214 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms