RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TRIM56Q9BRZ2 755 aaKnown RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 CCM2Q9BSQ5 444 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 MARCH4Q9P2E8 410 aaPredicted RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 TMPRSS11EQ9UL52 423 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 OAS3Q9Y6K5 1087 aaKnown RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 ASH1LQ9NR48 2969 aaKnown RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 LRP4O75096 1905 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 E5RI56 91 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 CTIFO43310 598 aaKnown RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 RIPK2O43353 540 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 NOBOXO60393 691 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 DNAJC6O75061 913 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 MTX2O75431 263 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 FAM153BP0C7A2 387 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 GLB1P16278 677 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 GP5P40197 560 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 SKIV2L2P42285 1042 aaKnown RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 POLD2P49005 469 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 CDKN1CP49918 316 aaPredicted RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 CLCNKAP51800 687 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 EIF3BP55884 814 aaKnown RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 CTBP1Q13363 440 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 FAM153CQ494X1 144 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 GRTP1Q5TC63 336 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 CHST15Q7LFX5 561 aaPredicted RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 STRA8Q7Z7C7 330 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 Q8N9G6 341 aaPredicted RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 FAM46DQ8NEK8 389 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 AENQ8WTP8 325 aaKnown RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 LPGAT1Q92604 370 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 SGF29Q96ES7 293 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 VPS39Q96JC1 886 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 MRPL40Q9NQ50 206 aaKnown RBP17.09■□□□□ 0.33
CPSF4-209ENST00000465132 WDR70Q9NW82 654 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 PISDQ9UG56 409 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 ACSL5Q9ULC5 683 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 LOXL2Q9Y4K0 774 aa17.09■□□□□ 0.33
CPSF4-209ENST00000465132 MGAT4DA6NG13 374 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 OR2AG2A6NM03 316 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 LIN7AO14910 233 aaPredicted RBP17.08■□□□□ 0.32
CPSF4-209ENST00000465132 NVLO15381 856 aaKnown RBP17.08■□□□□ 0.32
CPSF4-209ENST00000465132 GPR39O43194 453 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 VPS26AO75436 327 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 APOA4P06727 396 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 JMJD7P0C870 316 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 PKMP14618 531 aaKnown RBP17.08■□□□□ 0.32
CPSF4-209ENST00000465132 PNLIPP16233 465 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 IDSP22304 550 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 CNTFP26441 200 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 SERPINB9P50453 376 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 SLC12A2P55011 1212 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 ZFP36L1Q07352 338 aaKnown RBP17.08■□□□□ 0.32
CPSF4-209ENST00000465132 TGIF1Q15583 401 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 KBTBD12Q3ZCT8 623 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 SYTL3Q4VX76 610 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 TRMT10BQ6PF06 316 aaKnown RBP17.08■□□□□ 0.32
CPSF4-209ENST00000465132 DENND6AQ8IWF6 608 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 SFTPA2Q8IWL1 248 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 PPM1NQ8N819 430 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 TSPAN17Q96FV3 270 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 TXLNGYQ9BZA5 131 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 TMEM168Q9H0V1 697 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 P2RY12Q9H244 342 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 ARFGAP3Q9NP61 516 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 IL1RAPL1Q9NZN1 696 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 KLHL42Q9P2K6 505 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 RNF215Q9Y6U7 377 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 PIKFYVEQ9Y2I7 2098 aa17.08■□□□□ 0.32
CPSF4-209ENST00000465132 EXOC1LA0A1B0GW35 172 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 B4DGG1 531 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 POP7O75817 140 aaKnown RBP17.07■□□□□ 0.32
CPSF4-209ENST00000465132 INHBAP08476 426 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 MYBL2P10244 700 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 CHRM3P20309 590 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 CD9P21926 228 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 MSH2P43246 934 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 MAPK9P45984 424 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 RPA4Q13156 261 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 SEMA3AQ14563 771 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 C14orf28Q4W4Y0 310 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 LRRC8EQ6NSJ5 796 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 FAM45BPQ6NSW5 357 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 CRTC3Q6UUV7 619 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 DET1Q7L5Y6 550 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 CROCCP2Q86T23 111 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 GSPT2Q8IYD1 628 aaKnown RBP17.07■□□□□ 0.32
CPSF4-209ENST00000465132 UNC5BQ8IZJ1 945 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 MREGQ8N565 214 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 OR2L2Q8NH16 312 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 FAM45AQ8TCE6 357 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 HM13Q8TCT9 377 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 GPBAR1Q8TDU6 330 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 ASZ1Q8WWH4 475 aa17.07■□□□□ 0.32
CPSF4-209ENST00000465132 KCNJ9Q92806 393 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms