RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PPP4R1Q8TF05 950 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 FAR1Q8WVX9 515 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 AP1M1Q9BXS5 423 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 KLHL25Q9H0H3 589 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 FAM153AQ9UHL3 310 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 C2orf74A8MZ97 194 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 AGPSO00116 658 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 MASP2O00187 686 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 OR2B3O76000 313 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 CDC16Q13042 620 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 HIF1AQ16665 826 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 SIRPB2Q5JXA9 342 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 IRAK1BP1Q5VVH5 260 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 RHBDD2Q6NTF9 364 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 FJX1Q86VR8 437 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 CPNE8Q86YQ8 564 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 SLC25A41Q8N5S1 370 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 PROKR1Q8TCW9 393 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 BLOC1S5Q8TDH9 187 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 RAPGEF5Q92565 580 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 RMDN2Q96LZ7 410 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 TXLNGQ9NUQ3 528 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 CTTNBP2NLQ9P2B4 639 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 LCMT1Q9UIC8 334 aa14.01□□□□□ -0.17
SMC1A-204ENST00000463684 PCSK5Q92824 1860 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 LOC285095A0A1B0GVY8 99 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 A0A1W2PQJ5 194 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 CCDC66A2RUB6 948 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 LRRD1A4D1F6 860 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 BTN3A3O00478 584 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 BTN3A1O00481 513 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 E2F3O00716 465 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 APOL1O14791 398 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 BUD23O43709 281 aaKnown RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 EPOP01588 193 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 STSP08842 583 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 PVRP15151 417 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 ZFXP17010 805 aaPredicted RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 TSFMP43897 325 aaKnown RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 WNT3AP56704 352 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 ZNF169Q14929 603 aaPredicted RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 NOMO1Q15155 1222 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 BCL7AQ4VC05 210 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 AGAP7PQ5VUJ5 663 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 FCRL6Q6DN72 434 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 ALKBH5Q6P6C2 394 aaKnown RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 PPP1R32Q7Z5V6 425 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 NACC2Q96BF6 587 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 DCUN1D1Q96GG9 259 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 RBM41Q96IZ5 413 aaKnown RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 CNDP1Q96KN2 507 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 LINC00615Q96LM1 132 aaPredicted RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 TEKT5Q96M29 485 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 AGAP4Q96P64 663 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 TFB2MQ9H5Q4 396 aaKnown RBP14□□□□□ -0.17
SMC1A-204ENST00000463684 SMOXQ9NWM0 555 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 APCP25054 2843 aa14□□□□□ -0.17
SMC1A-204ENST00000463684 A0A087X0T9 212 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 ZNF487B1APH4 448 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 IFRD1O00458 451 aaPredicted RBP13.99□□□□□ -0.17
SMC1A-204ENST00000463684 GAPDHSO14556 408 aaPredicted RBP13.99□□□□□ -0.17
SMC1A-204ENST00000463684 STX7O15400 261 aaKnown RBP13.99□□□□□ -0.17
SMC1A-204ENST00000463684 SERPING1P05155 500 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 FAM228BP0C875 321 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 RALBP11234 206 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 ART3Q13508 389 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 SLC9A5Q14940 896 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 PRAMEF13Q5VWM6 474 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 B3GNTL1Q67FW5 361 aaPredicted RBP13.99□□□□□ -0.17
SMC1A-204ENST00000463684 SLC9A4Q6AI14 798 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 ZNF449Q6P9G9 518 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 SARM1Q6SZW1 724 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 FAM180AQ6UWF9 173 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 NPNTQ6UXI9 565 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 GDF7Q7Z4P5 450 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 DAAM2Q86T65 1068 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 AMIGO1Q86WK6 493 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 PARP9Q8IXQ6 854 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMC1A-204ENST00000463684 SPRTNQ9H040 489 aaPredicted RBP13.99□□□□□ -0.17
SMC1A-204ENST00000463684 DEF6Q9H4E7 631 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 EPS8L2Q9H6S3 715 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 IRAK4Q9NWZ3 460 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 ACTR10Q9NZ32 417 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 CDYLQ9Y232 598 aa13.99□□□□□ -0.17
SMC1A-204ENST00000463684 CROCCQ5TZA2 2017 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 PRAMEF1O95521 474 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 PTPN3P26045 913 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 CHRNA4P43681 627 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 TLR1Q15399 786 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 SLC1A5Q15758 541 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 NKAIN1Q4KMZ8 207 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 ODF2Q5BJF6 829 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 MRPL14Q6P1L8 145 aaKnown RBP13.98□□□□□ -0.17
SMC1A-204ENST00000463684 KDELC1Q6UW63 502 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 IGFL2Q6UWQ7 119 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 RFX6Q8HWS3 928 aa13.98□□□□□ -0.17
SMC1A-204ENST00000463684 LILRA3Q8N6C8 439 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms