RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PCDHGA5Q9Y5G8 931 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 RAI2Q9Y5P3 530 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 DNAJC15Q9Y5T4 150 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 EML5Q05BV3 1969 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 CKAP5Q14008 2032 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PIKFYVEQ9Y2I7 2098 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 CFAP54Q96N23 3096 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 H3BMM5 538 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FZD6O60353 706 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 CD160O95971 181 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ESR1P03372 595 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PRR35P0CG20 571 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ACADMP11310 421 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 VCLP18206 1134 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 OXTRP30559 389 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PTGER3P43115 390 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 STK19P49842 368 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TPMTP51580 245 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 AQP4P55087 323 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PKNOX1P55347 436 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FOXM1Q08050 763 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 MMEL1Q495T6 779 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 LPCAT4Q643R3 524 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 UGT3A1Q6NUS8 523 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PAQR3Q6TCH7 311 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 KIAA1324Q6UXG2 1013 aaKnown RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 LPCAT2Q7L5N7 544 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SPATA19Q7Z5L4 167 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FBXO39Q8N4B4 442 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 MARVELD2Q8N4S9 558 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 EFCAB3Q8N7B9 438 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 GOLM1Q8NBJ4 401 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 BHLHE22Q8NFJ8 381 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ZNF483Q8TF39 744 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TWIST2Q8WVJ9 160 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 KCNJ9Q92806 393 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 LRGUKQ96M69 825 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FAM129BQ96TA1 746 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 HOPXQ9BPY8 73 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 Q9H521 79 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 LHX3Q9UBR4 397 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 VPS51Q9UID3 782 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 CROTQ9UKG9 612 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TCRBV3S1A0A5B6 114 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 UBA6A0AVT1 1052 aaPredicted RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 GOLGA8CPA6NN73 597 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MRASO14807 208 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CFLARO15519 480 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 SNAP91O60641 907 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 RNASEH1O60930 286 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 TMCC1O94876 653 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 EPN2O95208 641 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MLYCDO95822 493 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MT-CO1P00395 513 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 ALDOCP09972 364 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 PIRTP0C851 137 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 GFAPP14136 432 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 LBPP18428 481 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CD6P30203 668 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 FMO4P31512 558 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CSNK1DP48730 415 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 ERFP50548 548 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 AP1S1P61966 158 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 RPS14P62263 151 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MRPS22P82650 360 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 RHDQ02161 417 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CLCQ05315 142 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 SFSWAPQ12872 951 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 TRAF2Q12933 501 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 PPP1R3AQ16821 1122 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 PFKFB4Q16877 469 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 PLA2G2CQ5R387 149 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 ZNF776Q68DI1 518 aaPredicted RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CLEC6AQ6EIG7 209 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 RETSATQ6NUM9 610 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CERS6Q6ZMG9 384 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 RPS27LQ71UM5 84 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MINDY1Q8N5J2 469 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 PNPLA1Q8N8W4 532 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 HIPK4Q8NE63 616 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 FUBP1Q96AE4 644 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 C3orf30Q96M34 536 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 GPATCH1Q9BRR8 931 aaKnown RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MTG2Q9H4K7 406 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MAGEE1Q9HCI5 957 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MID1IP1Q9NPA3 183 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 SDR39U1Q9NRG7 319 aaPredicted RBP9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CCDC167Q9P0B6 97 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 ABCD2Q9UBJ2 740 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 RNF112Q9ULX5 631 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 SUFUQ9UMX1 484 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 CYP8B1Q9UNU6 501 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 FIS1Q9Y3D6 152 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 PCDHB1Q9Y5F3 818 aa9.73□□□□□ -0.85
PTPRD-207ENST00000463477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 SUPT3HB4E1H0 165 aa9.72□□□□□ -0.85
PTPRD-207ENST00000463477 E7ENX8 843 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms