RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MC4RP32245 332 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 ADRA1AP35348 466 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 PTGIRP43119 386 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 CD151P48509 253 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 XIAPP98170 497 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 GSTM4Q03013 218 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 RPA4Q13156 261 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 ZRANB3Q5FWF4 1079 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 PLEKHS1Q5SXH7 462 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 TAS2R42Q7RTR8 314 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 RAB43Q86YS6 212 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 OR13C4Q8NGS5 318 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 NAT14Q8WUY8 206 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 KRT35Q92764 455 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 C17orf62Q9BQA9 187 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 DPH2Q9BQC3 489 aaPredicted RBP14.95□□□□□ -0.02
SKA3-204ENST00000462482 FAM96AQ9H5X1 160 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 COG4Q9H9E3 785 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 SLAMF7Q9NQ25 335 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 TCFL5Q9UL49 500 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 AGAP14A8MT82 685 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 E7EQ34 232 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 DDX3YO15523 660 aaKnown RBP14.94□□□□□ -0.02
SKA3-204ENST00000462482 TJP3O95049 919 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
SKA3-204ENST00000462482 VAV2P52735 878 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 ITGA1P56199 1179 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 ZNF517Q6ZMY9 492 aaPredicted RBP14.94□□□□□ -0.02
SKA3-204ENST00000462482 ARHGEF18Q6ZSZ5 1173 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 MED25Q71SY5 747 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 AMIGO1Q86WK6 493 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 SYTL1Q8IYJ3 562 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 LILRA3Q8N6C8 439 aaPredicted RBP14.94□□□□□ -0.02
SKA3-204ENST00000462482 TMEM102Q8N9M5 508 aaPredicted RBP14.94□□□□□ -0.02
SKA3-204ENST00000462482 SLC38A9Q8NBW4 561 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 OR1L3Q8NH93 324 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.94□□□□□ -0.02
SKA3-204ENST00000462482 PPM1MQ96MI6 270 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 SPATA13Q96N96 652 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 SLC29A3Q9BZD2 475 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 OSBPL8Q9BZF1 889 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 TFB2MQ9H5Q4 396 aaKnown RBP14.94□□□□□ -0.02
SKA3-204ENST00000462482 MAP10Q9P2G4 905 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 PCDHA3Q9Y5H8 950 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 PTPN13Q12923 2485 aa14.94□□□□□ -0.02
SKA3-204ENST00000462482 GOLGA6L9A6NEM1 432 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 QSOX1O00391 747 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 ZNF185O15231 689 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 PJA2O43164 708 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 SGTAO43765 313 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 KDM1AO60341 852 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 KLHL41O60662 606 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 MSL3P1P0C860 447 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 GNLYP22749 145 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 LMAN1P49257 510 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 ZNF140P52738 457 aaPredicted RBP14.93□□□□□ -0.02
SKA3-204ENST00000462482 RWDD2BP57060 319 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 TBX2Q13207 712 aaPredicted RBP14.93□□□□□ -0.02
SKA3-204ENST00000462482 NADK2Q4G0N4 442 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 C4orf17Q53FE4 359 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 PRAMEF17Q5VTA0 474 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 PAPD7Q5XG87 772 aaKnown RBP14.93□□□□□ -0.02
SKA3-204ENST00000462482 SERPINA9Q86WD7 417 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 OR52E1Q8NGJ3 308 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 CCDC110Q8TBZ0 833 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 TFGQ92734 400 aaPredicted RBP14.93□□□□□ -0.02
SKA3-204ENST00000462482 SGSM3Q96HU1 749 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 IP6K3Q96PC2 410 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 PSMG3-AS1Q96PY0 264 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 GORASP1Q9BQQ3 440 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 HGH1Q9BTY7 390 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 DHRS4Q9BTZ2 278 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 TRIM5Q9C035 493 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 MLXIPLQ9NP71 852 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 PCMTD2Q9NV79 361 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 GPR83Q9NYM4 423 aa14.93□□□□□ -0.02
SKA3-204ENST00000462482 GPN3Q9UHW5 284 aaPredicted RBP14.93□□□□□ -0.02
SKA3-204ENST00000462482 NAV2Q8IVL1 2488 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 A6NL46 340 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 F8W8V4 182 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 BTN3A3O00478 584 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 BTN3A1O00481 513 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 AP2A2O94973 939 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 LCA5LO95447 670 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 IGHEP01854 428 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 CD63P08962 238 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 ST6GAL1P15907 406 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 ACRV1P26436 265 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 PTPN7P35236 360 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 RORAP35398 523 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 UQCRFS1P47985 274 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 ABRQ12979 859 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 PRKG2Q13237 762 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 OLIG2Q13516 323 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 LAMB3Q13751 1172 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 NCF4Q15080 339 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 TMTC1Q8IUR5 882 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 PHC3Q8NDX5 983 aa14.92□□□□□ -0.02
SKA3-204ENST00000462482 DNAJC1Q96KC8 554 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms