RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ID4P47928 161 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 PGGT1BP53609 377 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 ILKQ13418 452 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 NR1D2Q14995 579 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 EMBQ6PCB8 327 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 ZNF438Q7Z4V0 828 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 SLCO6A1Q86UG4 719 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 ZNF761Q86XN6 746 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-221ENST00000462352 RBM12BQ8IXT5 1001 aaKnown RBP11.51□□□□□ -0.57
CPNE1-221ENST00000462352 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-221ENST00000462352 SLC44A1Q8WWI5 657 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 SH3KBP1Q96B97 665 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 GPR22Q99680 433 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 CCDC3Q9BQI4 270 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-221ENST00000462352 SLC40A1Q9NP59 571 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 ASF1AQ9Y294 204 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 PCDHGA1Q9Y5H4 931 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 HEBP2Q9Y5Z4 205 aa11.51□□□□□ -0.57
CPNE1-221ENST00000462352 EXOC1LA0A1B0GW35 172 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 POC1B-GALNT4F8VUJ3 575 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 CASC3O15234 703 aaKnown RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 DKK1O94907 266 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 ITGA2BP08514 1039 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 ENO3P13929 434 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 NDUFS1P28331 727 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 GPR3P46089 330 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 TAS2R39P59534 338 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 POU4F1Q01851 419 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 ABRQ12979 859 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 GPR18Q14330 331 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 KRT33BQ14525 404 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 UAP1Q16222 522 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 PAQR3Q6TCH7 311 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 TMEM26Q6ZUK4 368 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 SPRED1Q7Z699 444 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 CPNE9Q8IYJ1 553 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 Q8N9G6 341 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 PHC3Q8NDX5 983 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 OR5AR1Q8NGP9 310 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 CFAP61Q8NHU2 1237 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 CAVIN3Q969G5 261 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 FERD3LQ96RJ6 166 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 PAFAH2Q99487 392 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 SLC38A3Q99624 504 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 MVB12BQ9H7P6 319 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 UCK1Q9HA47 277 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 TSR3Q9UJK0 312 aaKnown RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 SLC39A10Q9ULF5 831 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 APOBEC2Q9Y235 224 aaKnown RBP11.5□□□□□ -0.57
CPNE1-221ENST00000462352 NFS1Q9Y697 457 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 COLEC10Q9Y6Z7 277 aa11.5□□□□□ -0.57
CPNE1-221ENST00000462352 A0A1W2PQM1 296 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 LILRA5A6NI73 299 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 EIF3FO00303 357 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-221ENST00000462352 B4GAT1O43505 415 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 MATN4O95460 622 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 INHBAP08476 426 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 CBSLP0DN79 551 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 ALDH4A1P30038 563 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 CBSP35520 551 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 HSD17B3P37058 310 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 MSH2P43246 934 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 SLC12A2P55011 1212 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 OR1D5P58170 312 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 CCL7P80098 99 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 PRKG2Q13237 762 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 BMPR2Q13873 1038 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 ZNF460Q14592 562 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 USP10Q14694 798 aaKnown RBP11.49□□□□□ -0.57
CPNE1-221ENST00000462352 PPM1JQ5JR12 505 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 UNC5DQ6UXZ4 953 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 CYHR1Q6ZMK1 362 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 NEK10Q6ZWH5 1172 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 CEP97Q8IW35 865 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 TBC1D21Q8IYX1 336 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 OR5K2Q8NHB8 316 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 EEF1AKMT1Q8WVE0 214 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 ZFPM2Q8WW38 1151 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 JPH3Q8WXH2 748 aaPredicted RBP11.49□□□□□ -0.57
CPNE1-221ENST00000462352 HGH1Q9BTY7 390 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 TBC1D10AQ9BXI6 508 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 ABCG4Q9H172 646 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 TRIT1Q9H3H1 467 aaKnown RBP11.49□□□□□ -0.57
CPNE1-221ENST00000462352 KIR3DX1Q9H7L2 352 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 CAB39LQ9H9S4 337 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 POPDC3Q9HBV1 291 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 KCNK4Q9NYG8 393 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 SLC24A2Q9UI40 661 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 RUVBL2Q9Y230 463 aaKnown RBP11.49□□□□□ -0.57
CPNE1-221ENST00000462352 IKBKGQ9Y6K9 419 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 ASXL3Q9C0F0 2248 aa11.49□□□□□ -0.57
CPNE1-221ENST00000462352 IGHV1OR21-1A0A087WYE8 117 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 HMX2A2RU54 273 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 ZW10O43264 779 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 OPA1O60313 960 aa11.48□□□□□ -0.57
CPNE1-221ENST00000462352 TSPAN12O95859 305 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms