RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CERS6Q6ZMG9 384 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 AMIGO1Q86WK6 493 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 EXD3Q8N9H8 876 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 OR52K1Q8NGK4 314 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 SKA2Q8WVK7 121 aaPredicted RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 TFGQ92734 400 aaPredicted RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 HES6Q96HZ4 224 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 GPR87Q9BY21 358 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 CLMPQ9H6B4 373 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 COG4Q9H9E3 785 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 LZTFL1Q9NQ48 299 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 LHX9Q9NQ69 397 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 RAB6BQ9NRW1 208 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 C1GALT1Q9NS00 363 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 HOMER3Q9NSC5 361 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 PIH1D1Q9NWS0 290 aaKnown RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 SIDT1Q9NXL6 827 aaKnown RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 POLG2Q9UHN1 485 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 ASF1AQ9Y294 204 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 MAN2B2Q9Y2E5 1009 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 TDRKHQ9Y2W6 561 aaKnown RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 ZNF106Q9H2Y7 1883 aaKnown RBP8.64□□□□□ -1.03
LDB1-203ENST00000461873 BAHCC1Q9P281 2608 aa8.64□□□□□ -1.03
LDB1-203ENST00000461873 COL6A6A6NMZ7 2263 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 C9J4A7 227 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 H7C0S8 307 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 GAPDHSO14556 408 aaPredicted RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 DDX3YO15523 660 aaKnown RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 LDB2O43679 373 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 LIASO43766 372 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 CREG1O75629 220 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 METTL18O95568 372 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 DLGAP3O95886 979 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 APOA4P06727 396 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 ADRA1DP25100 572 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 SHMT2P34897 504 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 ARCN1P48444 511 aaKnown RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 ARSDP51689 593 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 BASP1P80723 227 aaKnown RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 XIAPP98170 497 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 PRKG2Q13237 762 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 DNASE1L3Q13609 305 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 KCNAB1Q14722 419 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 BRD3Q15059 726 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 CRTC2Q53ET0 693 aaPredicted RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 LACTB2Q53H82 288 aaPredicted RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 CAPRIN2Q6IMN6 1127 aaKnown RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 TIPARPQ7Z3E1 657 aaKnown RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 PTRH1Q86Y79 214 aaKnown RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 SLC13A5Q86YT5 568 aaPredicted RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 TMEM139Q8IV31 216 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 D2HGDHQ8N465 521 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 TEX19Q8NA77 164 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 OR4L1Q8NH43 312 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 SLC35B2Q8TB61 432 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 RNF31Q96EP0 1072 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 SLC41A2Q96JW4 573 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 FOPNLQ96NB1 174 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 C17orf62Q9BQA9 187 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 HGH1Q9BTY7 390 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 ETNK1Q9HBU6 452 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 ZNF71Q9NQZ8 489 aaPredicted RBP8.63□□□□□ -1.03
LDB1-203ENST00000461873 ACSS2Q9NR19 701 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 STARD5Q9NSY2 213 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 BFARQ9NZS9 450 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 IL17BQ9UHF5 180 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 PADI2Q9Y2J8 665 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 MRFAP1Q9Y605 127 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 CAPN6Q9Y6Q1 641 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 ATMQ13315 3056 aa8.63□□□□□ -1.03
LDB1-203ENST00000461873 SLC9B1P1A6NJY1 282 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 AGAP14A8MT82 685 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 ISM1B1AKI9 464 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 TMEM150CB9EJG8 249 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 E7EQ34 232 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 NDUFS3O75489 264 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 RFPL1O75677 317 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 WISP1O95388 367 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 CD63P08962 238 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 FOLR1P15328 257 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 ZNF28P17035 718 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 WT1P19544 449 aaPredicted RBP8.62□□□□□ -1.03
LDB1-203ENST00000461873 PRDX3P30048 256 aaKnown RBP8.62□□□□□ -1.03
LDB1-203ENST00000461873 TTPAP49638 278 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 GDF10P55107 478 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 KLF1Q13351 362 aaPredicted RBP8.62□□□□□ -1.03
LDB1-203ENST00000461873 GPR19Q15760 415 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 PTRHD1Q6GMV3 140 aaKnown RBP8.62□□□□□ -1.03
LDB1-203ENST00000461873 DENND5AQ6IQ26 1287 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 PWWP2BQ6NUJ5 590 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 SDCCAG8Q86SQ7 713 aaPredicted RBP8.62□□□□□ -1.03
LDB1-203ENST00000461873 SYVN1Q86TM6 617 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 CLDN19Q8N6F1 224 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 PHC3Q8NDX5 983 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 TRIM58Q8NG06 486 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 OR52E1Q8NGJ3 308 aa8.62□□□□□ -1.03
LDB1-203ENST00000461873 DENND1AQ8TEH3 1009 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms