RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	MCU	Q8NE86	351 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	SPATA4	Q8NEY3	305 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	OR2L2	Q8NH16	312 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	JPH3	Q8WXH2	748 aa	Predicted RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	ELMO1	Q92556	727 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	EXTL1	Q92935	676 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	SLCO2A1	Q92959	643 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	PEX13	Q92968	403 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	SNF8	Q96H20	258 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	TRIM56	Q9BRZ2	755 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	CCM2	Q9BSQ5	444 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	TSSK1B	Q9BXA7	367 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	TBC1D10A	Q9BXI6	508 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	MRM3	Q9HC36	420 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	STARD5	Q9NSY2	213 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	POT1	Q9NUX5	634 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	IL1RAPL1	Q9NZN1	696 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	ZNF624	Q9P2J8	865 aa	Predicted RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	KLHL3	Q9UH77	587 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	PILRA	Q9UKJ1	303 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	RIMKLB	Q9ULI2	386 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	WDR37	Q9Y2I8	494 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	RPS6KL1	Q9Y6S9	549 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	SETX	Q7Z333	2677 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	AGAP14	A8MT82	685 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	IFRD1	O00458	451 aa	Predicted RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	CAPN5	O15484	640 aa	Predicted RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	BANF1	O75531	89 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	AP2A2	O94973	939 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	DLGAP3	O95886	979 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	LIF	P15018	202 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	SLC19A1	P41440	591 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	MAGEA6	P43360	314 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	PREP	P48147	710 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	TTPA	P49638	278 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	ITGA8	P53708	1063 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	EIF3B	P55884	814 aa	Known RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	ACVR1	Q04771	509 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	MAP7	Q14244	749 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	SEMA3A	Q14563	771 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	TBR1	Q16650	682 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	MRNIP	Q6NTE8	343 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	DUS1L	Q6P1R4	473 aa	Known RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	CEACAM20	Q6UY09	585 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	NAPRT	Q6XQN6	538 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	MAATS1	Q7Z4T9	603 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	PLXDC1	Q8IUK5	500 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	RBM12B	Q8IXT5	1001 aa	Known RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	CACNA2D3	Q8IZS8	1091 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	LILRA3	Q8N6C8	439 aa	Predicted RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	NCSTN	Q92542	709 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	STAMBPL1	Q96FJ0	436 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	CFAP36	Q96G28	342 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	KIFC1	Q9BW19	673 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	TREX1	Q9NSU2	369 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	TSR3	Q9UJK0	312 aa	Known RBP	12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	SNX24	Q9Y343	169 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	PRSS21	Q9Y6M0	314 aa		12.41	□□□□□ -0.42
FDPS-204	ENST00000461507	IGLV3-16	A0A075B6K0	115 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	SFTPC	P11686	197 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	TYRP1	P17643	537 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	CAPZB	P47756	277 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	GFER	P55789	205 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	DHX9	Q08211	1270 aa	Known RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	CALCOCO2	Q13137	446 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	CLCA4	Q14CN2	919 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	ANKRD20A4	Q4UJ75	823 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	PACS1	Q6VY07	963 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	PRSS42	Q7Z5A4	293 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	HOOK3	Q86VS8	718 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	PDIK1L	Q8N165	341 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	IL22RA1	Q8N6P7	574 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	GPR150	Q8NGU9	434 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	GSDMB	Q8TAX9	411 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	SKA2	Q8WVK7	121 aa	Predicted RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	SLC45A3	Q96JT2	553 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	C9orf72	Q96LT7	481 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	RAB33B	Q9H082	229 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	ADNP	Q9H2P0	1102 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	ZNF768	Q9H5H4	540 aa	Known RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	COG4	Q9H9E3	785 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	PPAN	Q9NQ55	473 aa	Known RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	EPHA6	Q9UF33	1036 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	GNPTG	Q9UJJ9	305 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	ACSL5	Q9ULC5	683 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	CHMP2B	Q9UQN3	213 aa		12.4	□□□□□ -0.42
FDPS-204	ENST00000461507	FAM237B	A0A1B0GVD1	139 aa		12.39	□□□□□ -0.43
FDPS-204	ENST00000461507	MAGEB16	A2A368	324 aa		12.39	□□□□□ -0.43
FDPS-204	ENST00000461507	KLHL33	A6NCF5	533 aa		12.39	□□□□□ -0.43
FDPS-204	ENST00000461507	IQCF5	A8MTL0	148 aa		12.39	□□□□□ -0.43
FDPS-204	ENST00000461507		A8MU76	341 aa		12.39	□□□□□ -0.43
FDPS-204	ENST00000461507	KIF2A	O00139	706 aa	Predicted RBP	12.39	□□□□□ -0.43
FDPS-204	ENST00000461507	RAD51C	O43502	376 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms