RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 UTP4Q969X6 686 aaKnown RBP16.97■□□□□ 0.31
CDK11A-209ENST00000460465 HIST1H2AHQ96KK5 128 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 HIST1H2AJQ99878 128 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 H2AFJQ9BTM1 129 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 IPPKQ9H8X2 491 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 MBNL1Q9NR56 388 aaKnown RBP16.97■□□□□ 0.31
CDK11A-209ENST00000460465 GULP1Q9UBP9 304 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 TMEM98Q9Y2Y6 226 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 TRIOBPQ9H2D6 2365 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 PABPN1LA6NDY0 278 aaKnown RBP16.97■□□□□ 0.31
CDK11A-209ENST00000460465 B2RBV5 119 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 MATN4O95460 622 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 UROSP10746 265 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 CDK3Q00526 305 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 IRF4Q15306 451 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 LETMD1Q6P1Q0 360 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 CRTC3Q6UUV7 619 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 ZNF547Q8IVP9 402 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 CFAP61Q8NHU2 1237 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 NUSAP1Q9BXS6 441 aaKnown RBP16.97■□□□□ 0.31
CDK11A-209ENST00000460465 OSBPL6Q9BZF3 934 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 KLC4Q9NSK0 619 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDK11A-209ENST00000460465 TAS2R1Q9NYW7 299 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 STK38LQ9Y2H1 464 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 ANGPTL3Q9Y5C1 460 aa16.97■□□□□ 0.31
CDK11A-209ENST00000460465 COPG1Q9Y678 874 aaKnown RBP16.97■□□□□ 0.31
CDK11A-209ENST00000460465 F5P12259 2224 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 KRT87PA6NCN2 255 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 K7EPI3 171 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 GYG2O15488 501 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 PAK4O96013 591 aaPredicted RBP16.96■□□□□ 0.31
CDK11A-209ENST00000460465 GLULP15104 373 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 PIK3R1P27986 724 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 PDHA2P29803 388 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 ADPRHP54922 357 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 RPS21P63220 83 aaKnown RBP16.96■□□□□ 0.31
CDK11A-209ENST00000460465 DOK6Q6PKX4 331 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 CHSY3Q70JA7 882 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDK11A-209ENST00000460465 SLC22A15Q8IZD6 547 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 CDYL2Q8N8U2 506 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 OR4F6Q8NGB9 312 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 FBXO27Q8NI29 283 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 MCOLN3Q8TDD5 553 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 FAM3CQ92520 227 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 ATP6V1E2Q96A05 226 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 SIPA1Q96FS4 1042 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 ZNF514Q96K75 400 aaPredicted RBP16.96■□□□□ 0.31
CDK11A-209ENST00000460465 RAB3IPQ96QF0 476 aaPredicted RBP16.96■□□□□ 0.31
CDK11A-209ENST00000460465 LGR4Q9BXB1 951 aa16.96■□□□□ 0.31
CDK11A-209ENST00000460465 VGLL3A8MV65 326 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 RNGTTO60942 597 aaKnown RBP16.96■□□□□ 0.3
CDK11A-209ENST00000460465 PSIP1O75475 530 aaKnown RBP16.96■□□□□ 0.3
CDK11A-209ENST00000460465 STK16O75716 305 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 LINC00032P0C843 101 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 CD72P21854 359 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 TRAF3Q13114 568 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 PLA2G4EQ3MJ16 856 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 TTC31Q49AM3 519 aaPredicted RBP16.96■□□□□ 0.3
CDK11A-209ENST00000460465 KIAA1161Q6NSJ0 714 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 METTL2BQ6P1Q9 378 aaKnown RBP16.96■□□□□ 0.3
CDK11A-209ENST00000460465 LONP2Q86WA8 852 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 CFAP206Q8IYR0 622 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 TCAIMQ8N3R3 496 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 TP53I13Q8NBR0 393 aaPredicted RBP16.96■□□□□ 0.3
CDK11A-209ENST00000460465 FOXJ1Q92949 421 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 CMTM5Q96DZ9 223 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 GPR34Q9UPC5 381 aa16.96■□□□□ 0.3
CDK11A-209ENST00000460465 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.3
CDK11A-209ENST00000460465 A0A1W2PQU0 124 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 ARHGEF33A8MVX0 844 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 LIN7AO14910 233 aaPredicted RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 KATNA1O75449 491 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 OTCP00480 354 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 CD1EP15812 388 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 PRDX6P30041 224 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 CCNG1P51959 295 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 ELF3P78545 371 aaPredicted RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 SMAD2Q15796 467 aaKnown RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 ZXDCQ2QGD7 858 aaPredicted RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 TMEM92Q6UXU6 159 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 EFL1Q7Z2Z2 1120 aaKnown RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 RBM15BQ8NDT2 890 aaKnown RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 LINC00615Q96LM1 132 aaPredicted RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 C1QTNF2Q9BXJ5 285 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 CADM1Q9BY67 442 aaKnown RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 AKTIPQ9H8T0 292 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 SCML1Q9UN30 329 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 LOC100653049A0A140TA62 436 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 MEI4A8MW99 385 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 UBDO15205 165 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 SLC22A2O15244 555 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 POP7O75817 140 aaKnown RBP16.95■□□□□ 0.3
CDK11A-209ENST00000460465 RASSF9O75901 435 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 KRT34O76011 436 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 CHEK2O96017 543 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 COX4I1P13073 169 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 GGT5P36269 586 aa16.95■□□□□ 0.3
CDK11A-209ENST00000460465 AP1S2P56377 157 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms